RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 FAM167A-AS1Q96KT0 104 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 HIGD1BQ9P298 99 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 FGF6P10767 208 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 PMVKQ15126 192 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 TEN1Q86WV5 123 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 C8orf31Q8N9H6 132 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 PTH2Q96A98 100 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 IGLV2-8P01709 118 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 PRO1854Q9UHT4 67 aa6.3□□□□□ -1.4
UBE4B-202ENST00000343090 PLCE1Q9P212 2302 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 COL4A4P53420 1690 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-202ENST00000343090 C6orf226Q5I0X4 101 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 TMEM131Q92545 1883 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 I3L3M4 83 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 PRR14LQ5THK1 2151 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 TNRC6AQ8NDV7 1962 aaKnown RBP6.29□□□□□ -1.4
UBE4B-202ENST00000343090 IGHV7-4-1A0A0J9YVY3 117 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 IGLV2-23P01705 113 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 Q96MF0 132 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 IGHV7-81A0A0B4J1V7 117 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 LINC01619G3V211 115 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 C2orf91Q6ZV80 131 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 ANKRD29Q8N6D5 301 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 TECTAO75443 2155 aa6.29□□□□□ -1.4
UBE4B-202ENST00000343090 VWC2LB2RUY7 222 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 F8VRH5 84 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 A0A1B0GXF2 115 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 BRWD1-AS2P59051 145 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 IGHV4-59P01825 116 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 GAGE2AQ6NT46 116 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 ATP6V0E2Q8NHE4 81 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 TMEM141Q96I45 108 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 WDR87Q6ZQQ6 2873 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 ZNRF2Q8NHG8 242 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 NCKAP5O14513 1909 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 FAM208BQ5VWN6 2430 aa6.28□□□□□ -1.4
UBE4B-202ENST00000343090 PRAC2D3DTV9 90 aa6.27□□□□□ -1.4
UBE4B-202ENST00000343090 PROP1O75360 226 aa6.27□□□□□ -1.4
UBE4B-202ENST00000343090 LOXL1Q08397 574 aaPredicted RBP6.27□□□□□ -1.4
UBE4B-202ENST00000343090 DEFB136Q30KP8 78 aa6.27□□□□□ -1.4
UBE4B-202ENST00000343090 CTSGP08311 255 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 CR1LQ2VPA4 569 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 CENPVL3A0A0U1RRI6 287 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 LEPROTO15243 131 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 IGHV4-38-2P0DP08 117 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 RPL32P62910 135 aaKnown RBP6.27□□□□□ -1.41
UBE4B-202ENST00000343090 RPL39LQ96EH5 51 aaKnown RBP6.27□□□□□ -1.41
UBE4B-202ENST00000343090 ZNF503Q96F45 646 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 SPATA25Q9BR10 227 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 IGLV11-55A0A075B6I3 123 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 TEX22C9J3V5 150 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 DEFB1P60022 68 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 UFSP1Q6NVU6 142 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 SPG11Q96JI7 2443 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 GATA3P23771 443 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 BLCAPP62952 87 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 DEFB112Q30KQ8 113 aa6.27□□□□□ -1.41
UBE4B-202ENST00000343090 C1orf229Q6ZS94 237 aaPredicted RBP6.27□□□□□ -1.41
UBE4B-202ENST00000343090 MUC6Q6W4X9 2439 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 IGHV4-61A0A0C4DH41 118 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 E9PLD3 99 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 PFN2P35080 140 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 Q71RC1 249 aaPredicted RBP6.26□□□□□ -1.41
UBE4B-202ENST00000343090 NBL1P41271 181 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
UBE4B-202ENST00000343090 NPBQ8NG41 125 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 TMEM126AQ9H061 195 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 TRACP01848 142 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 P0C879 139 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
UBE4B-202ENST00000343090 NRGNQ92686 78 aa6.26□□□□□ -1.41
UBE4B-202ENST00000343090 NDUFV3P56181 108 aaKnown RBP6.25□□□□□ -1.41
UBE4B-202ENST00000343090 Q8N7P7 452 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 MED12LQ86YW9 2145 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 ZFP36P26651 326 aaKnown RBP6.25□□□□□ -1.41
UBE4B-202ENST00000343090 C22orf34Q6ZV56 151 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 MBD6Q96DN6 1003 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 OVOL2Q9BRP0 275 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 NDUFA12Q9UI09 145 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 LGALS1P09382 135 aaKnown RBP6.25□□□□□ -1.41
UBE4B-202ENST00000343090 CARD19Q96LW7 228 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 SPANXDQ9BXN6 97 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 A0A096LPF7 62 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 J3QQQ9 107 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 RHODO00212 210 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 ODF1Q14990 250 aa6.25□□□□□ -1.41
UBE4B-202ENST00000343090 IGLV1-47P01700 117 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 ADORA2A-AS1P86434 159 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 LINC00322Q6ZN03 302 aaPredicted RBP6.24□□□□□ -1.41
UBE4B-202ENST00000343090 Q8N9W7 124 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 IGHV4-30-2A0A087WSY4 118 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 CFC1BP0CG36 223 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 CFC1P0CG37 223 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 INS-IGF2F8WCM5 200 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 HOXD3P31249 432 aaPredicted RBP6.24□□□□□ -1.41
UBE4B-202ENST00000343090 INSL3P51460 131 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 BUB3O43684 328 aa6.24□□□□□ -1.41
UBE4B-202ENST00000343090 AJUBAQ96IF1 538 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms