RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 RNF185Q96GF1 192 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 HIST1H2BLQ99880 126 aa12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 TIMM8BQ9Y5J9 83 aaPredicted RBP12.59□□□□□ -0.39
FRMD4A-202ENST00000342409 IGHV1OR15-1A0A075B7D0 117 aa12.58□□□□□ -0.4
FRMD4A-202ENST00000342409 AMBPP02760 352 aa12.58□□□□□ -0.4
FRMD4A-202ENST00000342409 ESDP10768 282 aa12.58□□□□□ -0.4
FRMD4A-202ENST00000342409 MRPL51Q4U2R6 128 aaKnown RBP12.58□□□□□ -0.4
FRMD4A-202ENST00000342409 KCNS1Q96KK3 526 aa12.58□□□□□ -0.4
FRMD4A-202ENST00000342409 FAM110AQ9BQ89 295 aa12.58□□□□□ -0.4
FRMD4A-202ENST00000342409 IGHV3-16A0A0C4DH30 117 aa12.57□□□□□ -0.4
FRMD4A-202ENST00000342409 CACNG7P62955 275 aa12.57□□□□□ -0.4
FRMD4A-202ENST00000342409 URB1-AS1Q96HZ7 61 aa12.57□□□□□ -0.4
FRMD4A-202ENST00000342409 U3KQK5 164 aa12.57□□□□□ -0.4
FRMD4A-202ENST00000342409 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
FRMD4A-202ENST00000342409 BAGE3Q86Y29 109 aa12.57□□□□□ -0.4
FRMD4A-202ENST00000342409 Q8N1Y9 231 aa12.57□□□□□ -0.4
FRMD4A-202ENST00000342409 MDFICQ9P1T7 246 aa12.57□□□□□ -0.4
FRMD4A-202ENST00000342409 NXPH4O95158 308 aa12.56□□□□□ -0.4
FRMD4A-202ENST00000342409 FABP4P15090 132 aa12.56□□□□□ -0.4
FRMD4A-202ENST00000342409 EVI2AP22794 236 aa12.56□□□□□ -0.4
FRMD4A-202ENST00000342409 STHQ8IWL8 128 aa12.56□□□□□ -0.4
FRMD4A-202ENST00000342409 C9orf85Q96MD7 179 aa12.56□□□□□ -0.4
FRMD4A-202ENST00000342409 NACAE9PAV3 2078 aa12.55□□□□□ -0.4
FRMD4A-202ENST00000342409 RAB4AP20338 218 aa12.55□□□□□ -0.4
FRMD4A-202ENST00000342409 CMC4P56277 68 aaPredicted RBP12.55□□□□□ -0.4
FRMD4A-202ENST00000342409 SPANXN1Q5VSR9 72 aa12.55□□□□□ -0.4
FRMD4A-202ENST00000342409 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 PRM2P04554 102 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 D6R8Y8 96 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 M0R381 172 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 GIG44P09565 113 aaPredicted RBP12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 C9orf66Q5T8R8 295 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 ZNF747Q9BV97 191 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 PHLDA3Q9Y5J5 127 aa12.54□□□□□ -0.4
FRMD4A-202ENST00000342409 S100A2P29034 98 aa12.53□□□□□ -0.4
FRMD4A-202ENST00000342409 INSL3P51460 131 aa12.53□□□□□ -0.4
FRMD4A-202ENST00000342409 OR10D4PQ8NGN7 298 aa12.53□□□□□ -0.4
FRMD4A-202ENST00000342409 NCR2O95944 276 aa12.52□□□□□ -0.41
FRMD4A-202ENST00000342409 XCL2Q9UBD3 114 aa12.52□□□□□ -0.41
FRMD4A-202ENST00000342409 C1orf158Q8N1D5 194 aa12.51□□□□□ -0.41
FRMD4A-202ENST00000342409 INSP01308 110 aa12.51□□□□□ -0.41
FRMD4A-202ENST00000342409 NIT1Q86X76 327 aa12.51□□□□□ -0.41
FRMD4A-202ENST00000342409 PACRGQ96M98 296 aaPredicted RBP12.51□□□□□ -0.41
FRMD4A-202ENST00000342409 PRELID3AQ96N28 172 aa12.51□□□□□ -0.41
FRMD4A-202ENST00000342409 LINC00467Q9BRT7 94 aa12.51□□□□□ -0.41
FRMD4A-202ENST00000342409 COL6A5A8TX70 2615 aa12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 PKD1L1Q8TDX9 2849 aa12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 NPYP01303 97 aa12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 GATA1P15976 413 aaPredicted RBP12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 LINC00518Q8N0U6 118 aa12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 ORMDL3Q8N138 153 aa12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 JPT2Q9H910 190 aa12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 KIF25-AS1Q9Y6Z4 181 aa12.5□□□□□ -0.41
FRMD4A-202ENST00000342409 TRGV11A0A075B6L2 103 aa12.49□□□□□ -0.41
FRMD4A-202ENST00000342409 CKS2P33552 79 aa12.49□□□□□ -0.41
FRMD4A-202ENST00000342409 DEFB125Q8N687 156 aa12.49□□□□□ -0.41
FRMD4A-202ENST00000342409 TMEM18Q96B42 140 aa12.49□□□□□ -0.41
FRMD4A-202ENST00000342409 CBY3A6NI87 242 aa12.48□□□□□ -0.41
FRMD4A-202ENST00000342409 IGLL1P15814 213 aa12.48□□□□□ -0.41
FRMD4A-202ENST00000342409 LINC00315P59091 139 aa12.48□□□□□ -0.41
FRMD4A-202ENST00000342409 C14orf178Q8N769 122 aaPredicted RBP12.48□□□□□ -0.41
FRMD4A-202ENST00000342409 RPL35AP18077 110 aaKnown RBP12.48□□□□□ -0.41
FRMD4A-202ENST00000342409 FAM19A2Q8N3H0 131 aa12.48□□□□□ -0.41
FRMD4A-202ENST00000342409 TRAV26-2A0A0B4J265 109 aa12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 WIPF1O43516 503 aa12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 HTN1P15515 57 aa12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 PYY3Q5JQD4 70 aa12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 RNASEKQ6P5S7 137 aaKnown RBP12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 SMIM15Q7Z3B0 74 aa12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 NRACQ8N912 160 aa12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 C11orf72Q8NBR9 251 aa12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 LINC01587Q99440 93 aa12.47□□□□□ -0.41
FRMD4A-202ENST00000342409 PPBPP02775 128 aa12.46□□□□□ -0.41
FRMD4A-202ENST00000342409 POM121L12Q8N7R1 296 aa12.46□□□□□ -0.41
FRMD4A-202ENST00000342409 AP1S3Q96PC3 154 aa12.46□□□□□ -0.41
FRMD4A-202ENST00000342409 DPH3P1Q9H4G8 78 aa12.46□□□□□ -0.41
FRMD4A-202ENST00000342409 AZU1P20160 251 aa12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 PMCHP20382 165 aa12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 Q6ZWC4 215 aa12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 CSNK1G2-AS1Q8NCQ2 148 aa12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 TNFRSF6BO95407 300 aa12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 LINC00614P0C842 121 aa12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 IFI27P40305 119 aaPredicted RBP12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 AMTP48728 403 aa12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 NUTF2P61970 127 aaKnown RBP12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 MCRIP2Q9BUT9 160 aaKnown RBP12.45□□□□□ -0.42
FRMD4A-202ENST00000342409 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
FRMD4A-202ENST00000342409 SMIM6P0DI80 62 aa12.44□□□□□ -0.42
FRMD4A-202ENST00000342409 CDPF1Q6NVV7 123 aa12.44□□□□□ -0.42
FRMD4A-202ENST00000342409 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
FRMD4A-202ENST00000342409 CHCHD1Q96BP2 118 aaKnown RBP12.44□□□□□ -0.42
FRMD4A-202ENST00000342409 SAMD10Q9BYL1 202 aa12.44□□□□□ -0.42
FRMD4A-202ENST00000342409 GSN-AS1Q9NRJ2 163 aa12.44□□□□□ -0.42
FRMD4A-202ENST00000342409 PMCHL1Q16048 86 aa12.43□□□□□ -0.42
FRMD4A-202ENST00000342409 C12orf57Q99622 126 aa12.43□□□□□ -0.42
FRMD4A-202ENST00000342409 HSBP1O75506 76 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 ZNF876PQ49A33 203 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms