RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 CRYGCP07315 174 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 SRSF2Q01130 221 aaKnown RBP11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 MORN5Q5VZ52 161 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 NEGR1Q7Z3B1 354 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 IGF2BP2-AS1Q96M15 143 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 INS-IGF2F8WCM5 200 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 USP9XQ93008 2570 aaPredicted RBP11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 C2orf70A6NJV1 201 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 LEPROTO15243 131 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 DLEU1O43261 78 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 LGALS9CQ6DKI2 356 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 WIPF2Q8TF74 440 aaPredicted RBP11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 E7EUB6 86 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 C20orf78Q9BR46 151 aa11.68□□□□□ -0.54
PCDHB13-201ENST00000341948 BUB3O43684 328 aa11.67□□□□□ -0.54
PCDHB13-201ENST00000341948 TMEM243Q9BU79 118 aa11.67□□□□□ -0.54
PCDHB13-201ENST00000341948 TMEM89A2RUT3 159 aa11.67□□□□□ -0.54
PCDHB13-201ENST00000341948 CGB3P0DN86 165 aa11.67□□□□□ -0.54
PCDHB13-201ENST00000341948 CGB7P0DN87 165 aa11.67□□□□□ -0.54
PCDHB13-201ENST00000341948 C11orf71Q6IPW1 123 aa11.67□□□□□ -0.54
PCDHB13-201ENST00000341948 PLA2G2AP14555 144 aa11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 CFHR4Q92496 578 aa11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 DLX4Q92988 240 aaPredicted RBP11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 ABCA12Q86UK0 2595 aa11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 GNRH2O43555 120 aa11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 IGLC2P0DOY2 106 aa11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 IGLC3P0DOY3 106 aa11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 C16orf54Q6UWD8 224 aa11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 NACAE9PAV3 2078 aa11.66□□□□□ -0.54
PCDHB13-201ENST00000341948 ODF3BA8MYP8 253 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 GPHB5Q86YW7 130 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 U3KQE9 123 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 GAGE6Q13070 117 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 CDSNQ15517 529 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 FAM167A-AS1Q96KT0 104 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 MRPL35Q9NZE8 188 aaKnown RBP11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 A0A0J9YY99 117 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 HLA-DRB4P13762 266 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 HLA-DRB4X5D2U9 266 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 EREGO14944 169 aa11.65□□□□□ -0.54
PCDHB13-201ENST00000341948 F8VRH5 84 aa11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 USP9YO00507 2555 aaPredicted RBP11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 IGKV1OR2-108A0A075B7D4 117 aa11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 A0A1B0GV72 72 aa11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 K7EMT4 169 aa11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 FSTL3O95633 263 aa11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 C4orf3Q8WVX3 66 aa11.64□□□□□ -0.55
PCDHB13-201ENST00000341948 IGLL1P15814 213 aa11.63□□□□□ -0.55
PCDHB13-201ENST00000341948 UTF1Q5T230 341 aa11.63□□□□□ -0.55
PCDHB13-201ENST00000341948 Q6YL49 198 aa11.63□□□□□ -0.55
PCDHB13-201ENST00000341948 LINC00574Q9H8X3 128 aa11.63□□□□□ -0.55
PCDHB13-201ENST00000341948 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
PCDHB13-201ENST00000341948 LINC01548A6NM66 108 aa11.62□□□□□ -0.55
PCDHB13-201ENST00000341948 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
PCDHB13-201ENST00000341948 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
PCDHB13-201ENST00000341948 UBE2V1Q13404 147 aa11.62□□□□□ -0.55
PCDHB13-201ENST00000341948 MRPL36Q9P0J6 103 aaKnown RBP11.62□□□□□ -0.55
PCDHB13-201ENST00000341948 WI2-2373I1.2A0A1W2PRP0 233 aa11.62□□□□□ -0.55
PCDHB13-201ENST00000341948 PROP1O75360 226 aa11.62□□□□□ -0.55
PCDHB13-201ENST00000341948 TRBV12-3P01733 135 aa11.62□□□□□ -0.55
PCDHB13-201ENST00000341948 RHOHQ15669 191 aa11.61□□□□□ -0.55
PCDHB13-201ENST00000341948 C2orf82Q6UX34 121 aa11.61□□□□□ -0.55
PCDHB13-201ENST00000341948 VWC2LB2RUY7 222 aa11.61□□□□□ -0.55
PCDHB13-201ENST00000341948 COX8AP10176 69 aa11.61□□□□□ -0.55
PCDHB13-201ENST00000341948 KLF5Q13887 457 aaPredicted RBP11.61□□□□□ -0.55
PCDHB13-201ENST00000341948 CRIP3Q6Q6R5 217 aa11.61□□□□□ -0.55
PCDHB13-201ENST00000341948 C11orf1Q9H5F2 150 aa11.61□□□□□ -0.55
PCDHB13-201ENST00000341948 DOPEY1Q5JWR5 2465 aa11.61□□□□□ -0.55
PCDHB13-201ENST00000341948 SPRY2O43597 315 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 P0C879 139 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 Q6ZPA2 131 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 TMEM61Q8N0U2 210 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 OVOL2Q9BRP0 275 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 COX11Q9Y6N1 276 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 SPART-AS1P0CW21 52 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 SMAD5-AS1Q9Y6J3 95 aa11.6□□□□□ -0.55
PCDHB13-201ENST00000341948 LY6G6DO95868 133 aa11.59□□□□□ -0.55
PCDHB13-201ENST00000341948 ANGP03950 147 aaKnown RBP11.59□□□□□ -0.55
PCDHB13-201ENST00000341948 SNHG12Q9BXW3 62 aa11.59□□□□□ -0.55
PCDHB13-201ENST00000341948 NDUFA12Q9UI09 145 aa11.59□□□□□ -0.55
PCDHB13-201ENST00000341948 K7EMI3 77 aa11.59□□□□□ -0.55
PCDHB13-201ENST00000341948 ZNF747Q9BV97 191 aa11.59□□□□□ -0.55
PCDHB13-201ENST00000341948 C2CD3Q4AC94 2353 aa11.59□□□□□ -0.55
PCDHB13-201ENST00000341948 IGHG4P01861 327 aa11.59□□□□□ -0.55
PCDHB13-201ENST00000341948 SIGMAR1Q99720 223 aa11.58□□□□□ -0.55
PCDHB13-201ENST00000341948 LRRK2Q5S007 2527 aa11.58□□□□□ -0.56
PCDHB13-201ENST00000341948 COA6Q5JTJ3 125 aaKnown RBP11.58□□□□□ -0.56
PCDHB13-201ENST00000341948 TRAV8-3A0A0A6YYJ7 113 aa11.58□□□□□ -0.56
PCDHB13-201ENST00000341948 INSL3P51460 131 aa11.58□□□□□ -0.56
PCDHB13-201ENST00000341948 LAMTOR3Q9UHA4 124 aa11.58□□□□□ -0.56
PCDHB13-201ENST00000341948 PFN2P35080 140 aa11.57□□□□□ -0.56
PCDHB13-201ENST00000341948 RNF152Q8N8N0 203 aa11.57□□□□□ -0.56
PCDHB13-201ENST00000341948 DKK2Q9UBU2 259 aa11.57□□□□□ -0.56
PCDHB13-201ENST00000341948 KLF12Q9Y4X4 402 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms