RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 UFSP1Q6NVU6 142 aa11.5□□□□□ -0.57
BRCC3-202ENST00000340647 JPT2Q9H910 190 aa11.5□□□□□ -0.57
BRCC3-202ENST00000340647 LY96Q9Y6Y9 160 aa11.5□□□□□ -0.57
BRCC3-202ENST00000340647 TRBV6-4A0A1B0GX49 114 aa11.49□□□□□ -0.57
BRCC3-202ENST00000340647 IFNA7P01567 189 aa11.49□□□□□ -0.57
BRCC3-202ENST00000340647 ZNF345Q14585 488 aa11.49□□□□□ -0.57
BRCC3-202ENST00000340647 PCNPQ8WW12 178 aaKnown RBP11.49□□□□□ -0.57
BRCC3-202ENST00000340647 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
BRCC3-202ENST00000340647 TXNDC17Q9BRA2 123 aa11.49□□□□□ -0.57
BRCC3-202ENST00000340647 SAMD10Q9BYL1 202 aa11.49□□□□□ -0.57
BRCC3-202ENST00000340647 HMSDA8MTL9 139 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 FABP5P3A8MUU1 101 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 KRBOX1C9JBD0 128 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 ZFP69Q49AA0 526 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 DNLZQ5SXM8 178 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 MAPKAPK5-AS1Q8N8E1 139 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 PARLQ9H300 379 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 FAT1Q14517 4588 aa11.48□□□□□ -0.57
BRCC3-202ENST00000340647 SH2D1AO60880 128 aa11.47□□□□□ -0.57
BRCC3-202ENST00000340647 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
BRCC3-202ENST00000340647 NKX6-2Q9C056 277 aaPredicted RBP11.47□□□□□ -0.57
BRCC3-202ENST00000340647 A0A087WTM6 91 aa11.46□□□□□ -0.57
BRCC3-202ENST00000340647 TRBV6-1A0A0K0K1D8 114 aa11.46□□□□□ -0.57
BRCC3-202ENST00000340647 CIDEAO60543 219 aa11.46□□□□□ -0.57
BRCC3-202ENST00000340647 ZNF674Q2M3X9 581 aa11.46□□□□□ -0.57
BRCC3-202ENST00000340647 DMRTA1Q5VZB9 504 aa11.46□□□□□ -0.57
BRCC3-202ENST00000340647 NHLRC2Q8NBF2 726 aa11.46□□□□□ -0.57
BRCC3-202ENST00000340647 IL36BQ9NZH7 164 aa11.46□□□□□ -0.57
BRCC3-202ENST00000340647 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.57
BRCC3-202ENST00000340647 DNAH8Q96JB1 4490 aa11.46□□□□□ -0.58
BRCC3-202ENST00000340647 PAGE4O60829 102 aa11.45□□□□□ -0.58
BRCC3-202ENST00000340647 LTAP01374 205 aa11.45□□□□□ -0.58
BRCC3-202ENST00000340647 SEC11BP0C7V7 166 aa11.45□□□□□ -0.58
BRCC3-202ENST00000340647 RHOHQ15669 191 aa11.45□□□□□ -0.58
BRCC3-202ENST00000340647 PIK3CD-AS1Q5SR53 167 aa11.45□□□□□ -0.58
BRCC3-202ENST00000340647 Q8N3U1 123 aa11.45□□□□□ -0.58
BRCC3-202ENST00000340647 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
BRCC3-202ENST00000340647 GRIFINA4D1Z8 144 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 B4DEV8 164 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 H3BVH4 76 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 K7EP13 123 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 M0R036 132 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 CRYGDP07320 174 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 ARMS2P0C7Q2 107 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 PPT1P50897 306 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 LINC01556Q5JQF7 62 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 SH2D6Q7Z4S9 175 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 C14orf178Q8N769 122 aaPredicted RBP11.44□□□□□ -0.58
BRCC3-202ENST00000340647 FMC1Q96HJ9 113 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 ZFP30Q9Y2G7 519 aa11.44□□□□□ -0.58
BRCC3-202ENST00000340647 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 IGHV3-38A0A0C4DH36 116 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 BCL2L11O43521 198 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 MGST1P10620 155 aaKnown RBP11.43□□□□□ -0.58
BRCC3-202ENST00000340647 EVI2AP22794 236 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 ASIPP42127 132 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 CST9LP1Q5W188 147 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 ZFP2Q6ZN57 461 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 PRADC1Q9BSG0 188 aa11.43□□□□□ -0.58
BRCC3-202ENST00000340647 A0A1B0GV50 99 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 LRCOL1A6NCL2 159 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 A8MWV9 139 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 LELP1Q5T871 98 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 Q8N1X5 172 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 FAM213BQ8TBF2 198 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 SFT2D1Q8WV19 159 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 MLST8Q9BVC4 326 aa11.42□□□□□ -0.58
BRCC3-202ENST00000340647 A0A0D9SG52 128 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 SCO2A0A1W2PP80 73 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 IBA57-AS1B1ANH7 110 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 S100A4P26447 101 aaKnown RBP11.41□□□□□ -0.58
BRCC3-202ENST00000340647 KRTAP10-1P60331 282 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 CCL20P78556 96 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 LGALSLQ3ZCW2 172 aaPredicted RBP11.41□□□□□ -0.58
BRCC3-202ENST00000340647 FAM162BQ5T6X4 162 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 ATP6V0E2Q8NHE4 81 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 TCEAL7Q9BRU2 100 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 ZNF471Q9BX82 626 aaPredicted RBP11.41□□□□□ -0.58
BRCC3-202ENST00000340647 GTSF1LQ9H1H1 148 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
BRCC3-202ENST00000340647 TMSB15BA0A087X1C1 80 aa11.4□□□□□ -0.58
BRCC3-202ENST00000340647 UMAD1C9J7I0 102 aa11.4□□□□□ -0.58
BRCC3-202ENST00000340647 XGP55808 180 aa11.4□□□□□ -0.58
BRCC3-202ENST00000340647 ERVFC1-1P60608 527 aa11.4□□□□□ -0.58
BRCC3-202ENST00000340647 TMUB2Q71RG4 321 aa11.4□□□□□ -0.58
BRCC3-202ENST00000340647 STOML3Q8TAV4 291 aa11.4□□□□□ -0.58
BRCC3-202ENST00000340647 GAGE12JA6NER3 117 aa11.39□□□□□ -0.59
BRCC3-202ENST00000340647 UBE2G1P62253 170 aa11.39□□□□□ -0.59
BRCC3-202ENST00000340647 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
BRCC3-202ENST00000340647 GAGE1Q13065 139 aa11.39□□□□□ -0.59
BRCC3-202ENST00000340647 GAGE4Q13068 117 aa11.39□□□□□ -0.59
BRCC3-202ENST00000340647 GAGE5Q13069 117 aa11.39□□□□□ -0.59
BRCC3-202ENST00000340647 GAGE13Q4V321 117 aa11.39□□□□□ -0.59
BRCC3-202ENST00000340647 OR10J3Q5JRS4 329 aa11.39□□□□□ -0.59
BRCC3-202ENST00000340647 SFRP2Q96HF1 295 aa11.39□□□□□ -0.59
BRCC3-202ENST00000340647 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
BRCC3-202ENST00000340647 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms