RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PRB1P04280 392 aa10.98□□□□□ -0.65
CPSF7-201ENST00000340437 SRSF9Q13242 221 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPSF7-201ENST00000340437 ETDBQ3ZM63 59 aa10.98□□□□□ -0.65
CPSF7-201ENST00000340437 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
CPSF7-201ENST00000340437 JPT2Q9H910 190 aa10.98□□□□□ -0.65
CPSF7-201ENST00000340437 OOSP1A8MZH6 123 aa10.97□□□□□ -0.65
CPSF7-201ENST00000340437 A0A087WWL8 130 aa10.97□□□□□ -0.65
CPSF7-201ENST00000340437 EBI3Q14213 229 aa10.97□□□□□ -0.65
CPSF7-201ENST00000340437 C11orf44Q8N8P7 122 aa10.97□□□□□ -0.65
CPSF7-201ENST00000340437 A0A087WX48 190 aa10.97□□□□□ -0.65
CPSF7-201ENST00000340437 KLHL30-AS1Q8NEE0 82 aa10.97□□□□□ -0.65
CPSF7-201ENST00000340437 SMIM2Q9BVW6 85 aa10.97□□□□□ -0.65
CPSF7-201ENST00000340437 IGLV2-18A0A075B6J9 118 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 NBL1P41271 181 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 ASIPP42127 132 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 SMAGPQ0VAQ4 97 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 COX8CQ7Z4L0 72 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 LOC107984156A0A0G2JMH3 177 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
CPSF7-201ENST00000340437 C12orf74Q32Q52 190 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 ARL17AQ8IVW1 177 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 CNFNQ9BYD5 112 aa10.96□□□□□ -0.65
CPSF7-201ENST00000340437 APOMO95445 188 aa10.96□□□□□ -0.66
CPSF7-201ENST00000340437 EDN2P20800 178 aa10.96□□□□□ -0.66
CPSF7-201ENST00000340437 TRBV7-1A0A0A6YYK4 115 aa10.95□□□□□ -0.66
CPSF7-201ENST00000340437 IGLL5B9A064 214 aa10.95□□□□□ -0.66
CPSF7-201ENST00000340437 C2orf66Q6UXQ4 117 aa10.95□□□□□ -0.66
CPSF7-201ENST00000340437 C1orf122Q6ZSJ8 110 aa10.95□□□□□ -0.66
CPSF7-201ENST00000340437 SMPXQ9UHP9 88 aa10.95□□□□□ -0.66
CPSF7-201ENST00000340437 H7C1H1 209 aa10.95□□□□□ -0.66
CPSF7-201ENST00000340437 FBXL19-AS1Q494R0 122 aa10.95□□□□□ -0.66
CPSF7-201ENST00000340437 C5orf56Q8N8D9 126 aa10.95□□□□□ -0.66
CPSF7-201ENST00000340437 RBAKDNA6NC62 111 aa10.94□□□□□ -0.66
CPSF7-201ENST00000340437 BLCAPP62952 87 aa10.94□□□□□ -0.66
CPSF7-201ENST00000340437 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
CPSF7-201ENST00000340437 ZNF815PA8K554 130 aa10.94□□□□□ -0.66
CPSF7-201ENST00000340437 RASL10AQ92737 203 aa10.94□□□□□ -0.66
CPSF7-201ENST00000340437 HECTD1Q9ULT8 2610 aa10.94□□□□□ -0.66
CPSF7-201ENST00000340437 Q6ZS46 218 aa10.94□□□□□ -0.66
CPSF7-201ENST00000340437 TMEM190Q8WZ59 177 aa10.94□□□□□ -0.66
CPSF7-201ENST00000340437 TRAV21A0A0B4J279 112 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 SLC25A16P16260 332 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 AJUBAQ96IF1 538 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 ZNF256Q9Y2P7 627 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-201ENST00000340437 F8VRH5 84 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 HLA-DRB4P13762 266 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 LMO4P61968 165 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 HLA-DRB4X5D2U9 266 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 CFAP46Q8IYW2 2715 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 PRSS29PA6NIE9 313 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 H3BUX3 64 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 ARL6IP6Q8N6S5 226 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 PRADC1Q9BSG0 188 aa10.93□□□□□ -0.66
CPSF7-201ENST00000340437 MRPL16Q9NX20 251 aaKnown RBP10.93□□□□□ -0.66
CPSF7-201ENST00000340437 TSSC4Q9Y5U2 329 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-201ENST00000340437 IGHV3-64A0A075B6Q5 118 aa10.92□□□□□ -0.66
CPSF7-201ENST00000340437 TRAV12-3A0A0B4J271 114 aa10.92□□□□□ -0.66
CPSF7-201ENST00000340437 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
CPSF7-201ENST00000340437 ZNF418Q8TF45 676 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-201ENST00000340437 DPH3P1Q9H4G8 78 aa10.92□□□□□ -0.66
CPSF7-201ENST00000340437 FLNBO75369 2602 aaKnown RBP10.92□□□□□ -0.66
CPSF7-201ENST00000340437 VPS13CQ709C8 3753 aa10.92□□□□□ -0.66
CPSF7-201ENST00000340437 TMEM238C9JI98 176 aa10.92□□□□□ -0.66
CPSF7-201ENST00000340437 C19orf84I3L1E1 186 aa10.92□□□□□ -0.66
CPSF7-201ENST00000340437 PLNP26678 52 aa10.92□□□□□ -0.66
CPSF7-201ENST00000340437 RHPN1-AS1Q9BWJ2 59 aa10.92□□□□□ -0.66
CPSF7-201ENST00000340437 A0A1B0GWB2 263 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
CPSF7-201ENST00000340437 TMEM170BQ5T4T1 132 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 PGPEP1Q9NXJ5 209 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 IGHV4-38-2P0DP08 117 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 SRSF2Q01130 221 aaKnown RBP10.91□□□□□ -0.66
CPSF7-201ENST00000340437 C9orf139Q6ZV77 190 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 SPOCK3Q9BQ16 436 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 TRAV12-2A0A075B6T6 113 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 MYMXA0A1B0GTQ4 84 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 CD7P09564 240 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 ORMDL2Q53FV1 153 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 ZFAND2AQ8N6M9 145 aa10.91□□□□□ -0.66
CPSF7-201ENST00000340437 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.66
CPSF7-201ENST00000340437 H7C2G1 150 aa10.9□□□□□ -0.66
CPSF7-201ENST00000340437 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-201ENST00000340437 PSMB2P49721 201 aa10.9□□□□□ -0.66
CPSF7-201ENST00000340437 INSL3P51460 131 aa10.9□□□□□ -0.66
CPSF7-201ENST00000340437 UCNP55089 124 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 GAGE13Q4V321 117 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 SAMD13Q5VXD3 122 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 FAM159AQ6UWV7 190 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 FOXI2Q6ZQN5 318 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 BAALCQ8WXS3 180 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 LINC00477Q96M19 166 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 TP53TG1Q9Y2A0 90 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 LINC01549A6NIU2 74 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 PHLDA1Q8WV24 401 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-201ENST00000340437 MRAP2Q96G30 205 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 TM2D2Q9BX73 214 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms