RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 HOXA5P20719 270 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 TDRG1Q3Y452 100 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 SPXQ9BT56 116 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 NDFIP1Q9BT67 221 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 CTDSP1Q9GZU7 261 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 VAX2Q9UIW0 290 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 TP53TG3Q9ULZ0 132 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 RPH3ALQ9UNE2 315 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 TRAV21A0A0B4J279 112 aa9.3□□□□□ -0.92
SIRPB3P-201ENST00000340424 M0R2N4 97 aa9.3□□□□□ -0.92
SIRPB3P-201ENST00000340424 SLAQ13239 276 aa9.3□□□□□ -0.92
SIRPB3P-201ENST00000340424 ELOBQ15370 118 aa9.3□□□□□ -0.92
SIRPB3P-201ENST00000340424 ZNF726P1Q15940 193 aa9.3□□□□□ -0.92
SIRPB3P-201ENST00000340424 NACAE9PAV3 2078 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 IGLV2-18A0A075B6J9 118 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 TRBV24-1A0A075B6N3 115 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 CTXND1A0A1B0GTU2 59 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 A0A1W2PRE2 83 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 TMEM250H0YL14 139 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 TCRAP04437 139 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 FABP9Q0Z7S8 132 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 ZNRF2Q8NHG8 242 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 KCNS1Q96KK3 526 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 SDF2L1Q9HCN8 221 aa9.29□□□□□ -0.92
SIRPB3P-201ENST00000340424 A0A0J9YY99 117 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 TMEM183BQ1AE95 376 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 MUC21Q5SSG8 566 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 Q6ZQT7 251 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 SSX7Q7RTT5 188 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 TMEM183AQ8IXX5 376 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 UPK3BQ9BT76 320 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 MANBALQ9NQG1 85 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
SIRPB3P-201ENST00000340424 TRAV8-1A0A0A6YYK1 113 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 MAP1LC3B2A6NCE7 125 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 RTL8CO15255 209 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 GNG5P63218 68 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 C1orf134Q5TEV5 83 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 RASL10AQ92737 203 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 MAP1LC3BQ9GZQ8 125 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 MRPL16Q9NX20 251 aaKnown RBP9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 GNG13Q9P2W3 67 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 PRO0255Q9UI72 69 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 EPDR1Q9UM22 224 aa9.27□□□□□ -0.93
SIRPB3P-201ENST00000340424 NBDYA0A0U1RRE5 68 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 A0A1B0GV50 99 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 PRSS29PA6NIE9 313 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 GGTLC3B5MD39 225 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 S100PP25815 95 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 SUMO1P63165 101 aaKnown RBP9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 SAPCD1Q5SSQ6 148 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 VSIG2Q96IQ7 327 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 MDFICQ9P1T7 246 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 NAGKQ9UJ70 344 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 PSG8Q9UQ74 426 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 MUC4Q99102 2169 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 PKHD1P08F94 4074 aa9.26□□□□□ -0.93
SIRPB3P-201ENST00000340424 PKD1P98161 4303 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 PCP4L1A6NKN8 68 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 F6UZH7 168 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 PHOX2AO14813 284 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 PAX4O43316 350 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 CXCL1P09341 107 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 RPS10P46783 165 aaKnown RBP9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 TTC32Q5I0X7 151 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 Q9H8V8 135 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 HHLA3Q9XRX5 114 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 MRPS16Q9Y3D3 137 aaKnown RBP9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 ICOSQ9Y6W8 199 aa9.25□□□□□ -0.93
SIRPB3P-201ENST00000340424 DNAH11Q96DT5 4516 aa9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 A0A096LPF7 62 aa9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 IGHV3-16A0A0C4DH30 117 aa9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 A0A1W2PPQ1 181 aa9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 ZNF727A8MUV8 499 aa9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 M0R2P5 195 aa9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 PFN1P07737 140 aaKnown RBP9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 BTF3P20290 206 aaKnown RBP9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 MEF2BQ02080 365 aaPredicted RBP9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 DYNC1H1Q14204 4646 aaKnown RBP9.24□□□□□ -0.93
SIRPB3P-201ENST00000340424 TRAV4A0A0B4J268 109 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 TRGV4A0A0C4DH28 118 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 GCGP01275 180 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 IGLV2-11P01706 119 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 IGHV3-53P01767 116 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 TYMSP04818 313 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 CRYBA4P53673 196 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 FHL2Q14192 279 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 ESRGQ1W209 222 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 TXNDC17Q9BRA2 123 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 ARL2-SNX15V9GYD0 113 aa9.23□□□□□ -0.93
SIRPB3P-201ENST00000340424 TGIF2-C20orf24A0A0A6YYL0 155 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 IFITM10A6NMD0 228 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 CIDEAO60543 219 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 ORM1P02763 201 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms