RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
CSRP1-201ENST00000340006 NUP35Q8NFH5 326 aa10.7□□□□□ -0.7
CSRP1-201ENST00000340006 MEGF8Q7Z7M0 2845 aa10.7□□□□□ -0.7
CSRP1-201ENST00000340006 TMEM238LA0A1B0GVL6 79 aa10.69□□□□□ -0.7
CSRP1-201ENST00000340006 GRIFINA4D1Z8 144 aa10.69□□□□□ -0.7
CSRP1-201ENST00000340006 SPINK4O60575 86 aa10.69□□□□□ -0.7
CSRP1-201ENST00000340006 S100A4P26447 101 aaKnown RBP10.69□□□□□ -0.7
CSRP1-201ENST00000340006 ZMAT4Q9H898 229 aa10.69□□□□□ -0.7
CSRP1-201ENST00000340006 RETNQ9HD89 108 aa10.69□□□□□ -0.7
CSRP1-201ENST00000340006 AZU1P20160 251 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 RPS10P46783 165 aaKnown RBP10.68□□□□□ -0.7
CSRP1-201ENST00000340006 RPS20P60866 119 aaKnown RBP10.68□□□□□ -0.7
CSRP1-201ENST00000340006 DNLZQ5SXM8 178 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 TIMM8BQ9Y5J9 83 aaPredicted RBP10.68□□□□□ -0.7
CSRP1-201ENST00000340006 SMIM9A6NGZ8 99 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 TYMSP04818 313 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 FOXA3P55318 350 aaPredicted RBP10.68□□□□□ -0.7
CSRP1-201ENST00000340006 TDRG1Q3Y452 100 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 PGLYRP4Q96LB8 373 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 TP53TG1Q9Y2A0 90 aa10.68□□□□□ -0.7
CSRP1-201ENST00000340006 TCAPO15273 167 aa10.67□□□□□ -0.7
CSRP1-201ENST00000340006 B9D2Q9BPU9 175 aa10.67□□□□□ -0.7
CSRP1-201ENST00000340006 SPATA25Q9BR10 227 aa10.67□□□□□ -0.7
CSRP1-201ENST00000340006 TPPP3Q9BW30 176 aa10.67□□□□□ -0.7
CSRP1-201ENST00000340006 TRGV11A0A075B6L2 103 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 C1orf196B1AJZ1 125 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 ASIPP42127 132 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 EMP1P54849 157 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 MRPL54Q6P161 138 aaKnown RBP10.66□□□□□ -0.7
CSRP1-201ENST00000340006 ZFP82Q8N141 532 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 LINC00467Q9BRT7 94 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 X6R8D5 127 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 COTL1Q14019 142 aa10.66□□□□□ -0.7
CSRP1-201ENST00000340006 TM2D3Q9BRN9 247 aa10.65□□□□□ -0.7
CSRP1-201ENST00000340006 SNURFLB1AK76 121 aa10.65□□□□□ -0.71
CSRP1-201ENST00000340006 DEFB4AO15263 64 aa10.65□□□□□ -0.71
CSRP1-201ENST00000340006 MIFP14174 115 aa10.65□□□□□ -0.71
CSRP1-201ENST00000340006 ZNF493Q6ZR52 646 aa10.65□□□□□ -0.71
CSRP1-201ENST00000340006 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.71
CSRP1-201ENST00000340006 TMEM263Q8WUH6 116 aaKnown RBP10.65□□□□□ -0.71
CSRP1-201ENST00000340006 C16orf74Q96GX8 76 aa10.65□□□□□ -0.71
CSRP1-201ENST00000340006 IGHV3-16A0A0C4DH30 117 aa10.64□□□□□ -0.71
CSRP1-201ENST00000340006 ARMS2P0C7Q2 107 aa10.64□□□□□ -0.71
CSRP1-201ENST00000340006 IGLC6P0CF74 106 aa10.64□□□□□ -0.71
CSRP1-201ENST00000340006 FABP9Q0Z7S8 132 aa10.64□□□□□ -0.71
CSRP1-201ENST00000340006 LYZL1Q6UWQ5 148 aa10.64□□□□□ -0.71
CSRP1-201ENST00000340006 ATP5L2Q7Z4Y8 100 aa10.64□□□□□ -0.71
CSRP1-201ENST00000340006 H3BVH4 76 aa10.63□□□□□ -0.71
CSRP1-201ENST00000340006 TRGC2P03986 189 aa10.63□□□□□ -0.71
CSRP1-201ENST00000340006 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
CSRP1-201ENST00000340006 A0A1B0GUT8 65 aa10.63□□□□□ -0.71
CSRP1-201ENST00000340006 RNASE8Q8TDE3 154 aaKnown RBP10.63□□□□□ -0.71
CSRP1-201ENST00000340006 PHLDA3Q9Y5J5 127 aa10.63□□□□□ -0.71
CSRP1-201ENST00000340006 IGHV4-28A0A0C4DH34 117 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 MUC21A0A0G2JKD1 596 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 MUC21A0A140T8X8 626 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 A0A1B0GXF2 115 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 CTRLP40313 264 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 CAMPP49913 170 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 HBBP68871 147 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 RASL11AQ6T310 242 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 BORCS7Q96B45 105 aa10.62□□□□□ -0.71
CSRP1-201ENST00000340006 NOP10Q9NPE3 64 aaKnown RBP10.62□□□□□ -0.71
CSRP1-201ENST00000340006 NHLRC4P0CG21 123 aaPredicted RBP10.61□□□□□ -0.71
CSRP1-201ENST00000340006 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
CSRP1-201ENST00000340006 WDR73Q6P4I2 378 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 GNB1LQ9BYB4 327 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 TRAPPC1Q9Y5R8 145 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 COL7A1Q02388 2944 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 F2Z2F3 143 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 PHOX2AO14813 284 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 COX19Q49B96 90 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 TMEM136Q6ZRR5 245 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 C11orf72Q8NBR9 251 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 FRZBQ92765 325 aa10.61□□□□□ -0.71
CSRP1-201ENST00000340006 RIGQ13278 110 aa10.6□□□□□ -0.71
CSRP1-201ENST00000340006 Q8NAQ8 132 aa10.6□□□□□ -0.71
CSRP1-201ENST00000340006 SPXQ9BT56 116 aa10.6□□□□□ -0.71
CSRP1-201ENST00000340006 MUC4Q99102 2169 aa10.6□□□□□ -0.71
CSRP1-201ENST00000340006 MT-ND6P03923 174 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 OR5AL1P0C617 328 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 SPANXN1Q5VSR9 72 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 SSBP4Q9BWG4 385 aaPredicted RBP10.59□□□□□ -0.71
CSRP1-201ENST00000340006 CNFNQ9BYD5 112 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 M0R381 172 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 SNAI2O43623 268 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 HLA-DQA1P01909 254 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 NTF3P20783 257 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 DDTP30046 118 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 PKIAP61925 76 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 ZNF876PQ49A33 203 aa10.59□□□□□ -0.71
CSRP1-201ENST00000340006 MRPL18Q9H0U6 180 aaKnown RBP10.59□□□□□ -0.71
CSRP1-201ENST00000340006 TRGV1A0A0A0MS02 117 aa10.58□□□□□ -0.72
CSRP1-201ENST00000340006 A0A1B0GW15 77 aa10.58□□□□□ -0.72
CSRP1-201ENST00000340006 PLAC8L1A1L4L8 177 aa10.58□□□□□ -0.72
CSRP1-201ENST00000340006 M0R2P5 195 aa10.58□□□□□ -0.72
CSRP1-201ENST00000340006 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms