RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 DAND5Q8N907 189 aa10.24□□□□□ -0.77
USP47-202ENST00000339865 RNF5Q99942 180 aa10.24□□□□□ -0.77
USP47-202ENST00000339865 A0A0G2JRQ6 117 aa10.24□□□□□ -0.77
USP47-202ENST00000339865 RBAKDNA6NC62 111 aa10.24□□□□□ -0.77
USP47-202ENST00000339865 RNF152Q8N8N0 203 aa10.24□□□□□ -0.77
USP47-202ENST00000339865 WFDC11Q8NEX6 87 aa10.24□□□□□ -0.77
USP47-202ENST00000339865 PRR25Q96S07 402 aa10.24□□□□□ -0.77
USP47-202ENST00000339865 WI2-2373I1.2A0A1W2PRP0 233 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 LGALS9O00182 355 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 LY6HO94772 140 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 IGHV4-59P01825 116 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 A4D1N5 150 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 NDUFB8O95169 186 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 ADAMTSL3P82987 1691 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 H0YGX0 51 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 H3BQ85 93 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 UPK3BQ9BT76 320 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 TANC1Q9C0D5 1861 aa10.23□□□□□ -0.77
USP47-202ENST00000339865 OOSP1A8MZH6 123 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 TMEM256-PLSCR3K7ERE1 68 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 IGLV3-21P80748 117 aaPredicted RBP10.22□□□□□ -0.77
USP47-202ENST00000339865 Q6ZRM9 215 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 CEP192Q8TEP8 1941 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 FOXI1Q12951 378 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 Q6ZUT4 128 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 RNF138Q8WVD3 245 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
USP47-202ENST00000339865 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
USP47-202ENST00000339865 CAMK2N2Q96S95 79 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 MST1LQ2TV78 715 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 RUSC1-AS1Q66K80 236 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 C20orf204Q6ZNR8 217 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 TM2D2Q9BX73 214 aa10.22□□□□□ -0.77
USP47-202ENST00000339865 TMEM14BQ9NUH8 114 aa10.21□□□□□ -0.77
USP47-202ENST00000339865 LINC01619G3V211 115 aa10.21□□□□□ -0.77
USP47-202ENST00000339865 ATP6V0E1O15342 81 aa10.21□□□□□ -0.77
USP47-202ENST00000339865 CRYGSP22914 178 aa10.21□□□□□ -0.77
USP47-202ENST00000339865 C20orf78Q9BR46 151 aa10.21□□□□□ -0.77
USP47-202ENST00000339865 CDPF1Q6NVV7 123 aa10.21□□□□□ -0.78
USP47-202ENST00000339865 CLEC2BQ92478 149 aa10.21□□□□□ -0.78
USP47-202ENST00000339865 NCR3O14931 201 aa10.21□□□□□ -0.78
USP47-202ENST00000339865 IGHV2-5P01817 119 aa10.21□□□□□ -0.78
USP47-202ENST00000339865 IGLC1P0CG04 106 aa10.21□□□□□ -0.78
USP47-202ENST00000339865 C2CD3Q4AC94 2353 aa10.21□□□□□ -0.78
USP47-202ENST00000339865 FNDC1Q4ZHG4 1894 aaPredicted RBP10.2□□□□□ -0.78
USP47-202ENST00000339865 LYPD2Q6UXB3 125 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 C20orf197Q8N268 126 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 JMJD7-PLA2G4BH0Y9G9 81 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 UBE2D1P51668 147 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 NDUFV3P56181 108 aaKnown RBP10.2□□□□□ -0.78
USP47-202ENST00000339865 TMEM105Q8N8V8 129 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 LINC01545Q5VT33 79 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 PYGO2Q9BRQ0 406 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 ARTNQ5T4W7 220 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 RETNQ9HD89 108 aa10.2□□□□□ -0.78
USP47-202ENST00000339865 ALPK3Q96L96 1907 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 A0A0J9YWU9 116 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 RHOHQ15669 191 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 GNRH2O43555 120 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 BPESC1Q9GZL8 116 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 ZNF581Q9P0T4 197 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 COX7A2LO14548 114 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 FAM236DA0A1B0GTK5 79 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 LECT2O14960 151 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 FAM236CP0DP71 79 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 PRR4Q16378 134 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 LYPD6BQ8NI32 183 aa10.19□□□□□ -0.78
USP47-202ENST00000339865 MRPL36Q9P0J6 103 aaKnown RBP10.19□□□□□ -0.78
USP47-202ENST00000339865 Q6P435 159 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 MESP1Q9BRJ9 268 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 G3V318 75 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 CXCL5P42830 114 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 GAFA1Q96PS6 74 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 ZSWIM8A7E2V4 1837 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 ATP5G1P05496 136 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 VOPP1Q96AW1 172 aa10.18□□□□□ -0.78
USP47-202ENST00000339865 NOTCH4Q99466 2003 aa10.17□□□□□ -0.78
USP47-202ENST00000339865 PLXNA4Q9HCM2 1894 aa10.17□□□□□ -0.78
USP47-202ENST00000339865 LTAP01374 205 aa10.17□□□□□ -0.78
USP47-202ENST00000339865 RPL39LQ96EH5 51 aaKnown RBP10.17□□□□□ -0.78
USP47-202ENST00000339865 E9PLN8 166 aa10.17□□□□□ -0.78
USP47-202ENST00000339865 SDIM1Q6ZPB5 146 aa10.17□□□□□ -0.78
USP47-202ENST00000339865 ZNF747Q9BV97 191 aa10.17□□□□□ -0.78
USP47-202ENST00000339865 ZFP36L1Q07352 338 aaKnown RBP10.17□□□□□ -0.78
USP47-202ENST00000339865 AHDC1Q5TGY3 1603 aaPredicted RBP10.17□□□□□ -0.78
USP47-202ENST00000339865 TRBV10-2A0A0K0K1G8 114 aa10.17□□□□□ -0.78
USP47-202ENST00000339865 TDRG1Q3Y452 100 aa10.17□□□□□ -0.78
USP47-202ENST00000339865 A0A0G2JMZ2 1700 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 LRRC37A2A6NM11 1700 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 LRRC37AA6NMS7 1700 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 LOXL1Q08397 574 aaPredicted RBP10.16□□□□□ -0.78
USP47-202ENST00000339865 ESM1Q9NQ30 184 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 NUP210LQ5VU65 1888 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 IGKV1D-17A0A075B6S4 117 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 BPY2O14599 106 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 IGHV3-30P01768 117 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 IGHV3-33P01772 117 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 IGHV3-30-3P0DP02 117 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms