RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 Q6AWC8 147 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 ZNF492Q9P255 531 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 KLF12Q9Y4X4 402 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 IGHV4-30-2A0A087WSY4 118 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 SMIM13P0DJ93 91 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 UBE2E1P51965 193 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 RNF223E7ERA6 249 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 G3V4G9 280 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 BUB3O43684 328 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 IGLV2-11P01706 119 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 EDN2P20800 178 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 LINC00574Q9H8X3 128 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 MUC4Q99102 2169 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 IGHV3-16A0A0C4DH30 117 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 PRSS22Q9GZN4 317 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 MRPL16Q9NX20 251 aaKnown RBP6.35□□□□□ -1.39
HPS4-201ENST00000336873 MOB4Q9Y3A3 225 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 FBN2P35556 2912 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 NBPF19A0A087WUL8 3843 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 A0A1B0GXF2 115 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 ADARB2-AS1A8MUL3 147 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 CD5LO43866 347 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 DPM2O94777 84 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 IGHV3-53P01767 116 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 IGHV4-39P01824 125 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 IGHV4-59P01825 116 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 TTC32Q5I0X7 151 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 OR11H6Q8NGC7 330 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 DYNLRB2Q8TF09 96 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 RNF5Q99942 180 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 CELSR2Q9HCU4 2923 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 A0A1B0GWB2 263 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 KLHL30-AS1Q8NEE0 82 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 UBE2E2Q96LR5 201 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 KIR2DL4Q99706 377 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 SLC50A1Q9BRV3 221 aa6.35□□□□□ -1.39
HPS4-201ENST00000336873 TEX48A0A1B0GUV7 120 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 LAGE3Q14657 143 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 ODF1Q14990 250 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 PHLDA1Q8WV24 401 aaPredicted RBP6.34□□□□□ -1.39
HPS4-201ENST00000336873 GFRA4Q9GZZ7 299 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 MS4A6AQ9H2W1 248 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 TMEM14CQ9P0S9 112 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 ATRQ13535 2644 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 ZNF815PA8K554 130 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 MRGPRG-AS1Q2M3A8 158 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 MINOS1Q5TGZ0 78 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 LYPD1Q8N2G4 141 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 TTC9CQ8N5M4 171 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 YAE1D1Q9NRH1 226 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 MINOS1-NBL1R4GNA1 71 aa6.34□□□□□ -1.39
HPS4-201ENST00000336873 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 IGHV3-38A0A0C4DH36 116 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 TAX1BP3O14907 124 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 MYCNOSP40205 109 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 CTRLP40313 264 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 SRSF1Q07955 248 aaKnown RBP eCLIP6.34□□□□□ -1.4
HPS4-201ENST00000336873 PDE6HQ13956 83 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 CT83Q5H943 113 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 SAMD5Q5TGI4 173 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 NXT2Q9NPJ8 142 aaKnown RBP6.34□□□□□ -1.4
HPS4-201ENST00000336873 SMAD5-AS1Q9Y6J3 95 aa6.34□□□□□ -1.4
HPS4-201ENST00000336873 TEP1Q99973 2627 aaKnown RBP6.33□□□□□ -1.4
HPS4-201ENST00000336873 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 ID1P41134 155 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 ADAMTSL5Q6ZMM2 481 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 ZNF625Q96I27 306 aaPredicted RBP6.33□□□□□ -1.4
HPS4-201ENST00000336873 CCDC140Q96MF4 163 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 IGSF10Q6WRI0 2623 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 SIVA1O15304 175 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 CRYGBP07316 175 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 KLF5Q13887 457 aaPredicted RBP6.33□□□□□ -1.4
HPS4-201ENST00000336873 FAM110DQ8TAY7 271 aaPredicted RBP6.33□□□□□ -1.4
HPS4-201ENST00000336873 TRBV7-9A0A0J9YWB2 115 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 COX8AP10176 69 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 SNRPD3P62318 126 aaKnown RBP6.33□□□□□ -1.4
HPS4-201ENST00000336873 RAX2Q96IS3 184 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
HPS4-201ENST00000336873 IGKV2D-26A0A0A0MRZ7 120 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 IGHV1-69DA0A0B4J2H0 117 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 H3BMG7 143 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 IGHV1-69P01742 117 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 RPL39P62891 51 aaKnown RBP6.32□□□□□ -1.4
HPS4-201ENST00000336873 ETDBQ3ZM63 59 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 TEX29Q8N6K0 151 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 C11orf21Q9P2W6 132 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 HELZ2Q9BYK8 2649 aaKnown RBP6.32□□□□□ -1.4
HPS4-201ENST00000336873 TRAV2A0A0B4J234 112 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 ATP5LO75964 103 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 FXYD2P54710 66 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 GAGE5Q13069 117 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 GAGE6Q13070 117 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 ZNF876PQ49A33 203 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 C2orf66Q6UXQ4 117 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 OPRPNQ99935 248 aaPredicted RBP6.32□□□□□ -1.4
HPS4-201ENST00000336873 FSTL3O95633 263 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms