RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 H3BT86 120 aa10.21□□□□□ -0.77
HLCS-201ENST00000336648 A0A096LPF7 62 aa10.21□□□□□ -0.77
HLCS-201ENST00000336648 TMEM89A2RUT3 159 aa10.21□□□□□ -0.77
HLCS-201ENST00000336648 WFDC2Q14508 124 aa10.21□□□□□ -0.77
HLCS-201ENST00000336648 TIMM17AQ99595 171 aa10.21□□□□□ -0.77
HLCS-201ENST00000336648 DKK4Q9UBT3 224 aa10.21□□□□□ -0.77
HLCS-201ENST00000336648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.21□□□□□ -0.77
HLCS-201ENST00000336648 IGKV2-29A2NJV5 120 aaPredicted RBP10.21□□□□□ -0.77
HLCS-201ENST00000336648 CEP250Q9BV73 2442 aa10.21□□□□□ -0.78
HLCS-201ENST00000336648 XIRP1Q702N8 1843 aaKnown RBP10.21□□□□□ -0.78
HLCS-201ENST00000336648 A4D1N5 150 aa10.21□□□□□ -0.78
HLCS-201ENST00000336648 DIAPH2-AS1Q14236 149 aa10.21□□□□□ -0.78
HLCS-201ENST00000336648 GP9P14770 177 aa10.21□□□□□ -0.78
HLCS-201ENST00000336648 LGALS9O00182 355 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 DEFB112Q30KQ8 113 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 RNF183Q96D59 192 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 PLXNA3P51805 1871 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 CCL18P55774 89 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 CASC2Q6XLA1 102 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 PDE6GP18545 87 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 LINC00643Q86TS7 51 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 I3L2K1 104 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 MAPK1IP1LQ8NDC0 245 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 MYO7BQ6PIF6 2116 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 C16orf54Q6UWD8 224 aa10.2□□□□□ -0.78
HLCS-201ENST00000336648 K7EMT4 169 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 TRPM7Q96QT4 1865 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 IGLV11-55A0A075B6I3 123 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 UQCRQO14949 82 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 C17orf77Q96MU5 243 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 HIST2H2BCQ6DN03 193 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 Q6ZSR3 168 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 TMEM256-PLSCR3K7ERE1 68 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 UPK3BQ9BT76 320 aa10.19□□□□□ -0.78
HLCS-201ENST00000336648 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 FANCMQ8IYD8 2048 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 H0Y9J4 135 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 C11orf53Q8IXP5 236 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 FAM110AQ9BQ89 295 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 A0A0J9YY99 117 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 NDUFA1O15239 70 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 SLX1AQ9BQ83 275 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 CTSZQ9UBR2 303 aa10.18□□□□□ -0.78
HLCS-201ENST00000336648 GYPEP15421 78 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 TM2D2Q9BX73 214 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 SIP14410 1827 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 IGHV4-59P01825 116 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 Q6ZQT7 251 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 NCR3O14931 201 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 IGF2-ASQ6U949 168 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 PIP4P1Q86T03 277 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 IGHV7-81A0A0B4J1V7 117 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 UBE2AP49459 152 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 KRTAP27-1Q3LI81 207 aa10.17□□□□□ -0.78
HLCS-201ENST00000336648 K7EIM0 57 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 LECT2O14960 151 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 PI4KAP42356 2102 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 ATP5EP56381 51 aaPredicted RBP10.16□□□□□ -0.78
HLCS-201ENST00000336648 HEATR1Q9H583 2144 aaKnown RBP10.16□□□□□ -0.78
HLCS-201ENST00000336648 NDUFV3P56181 108 aaKnown RBP10.16□□□□□ -0.78
HLCS-201ENST00000336648 IGFL2Q6UWQ7 119 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 PIFOQ8TCI5 191 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 ZSWIM8A7E2V4 1837 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 C4orf48Q5BLP8 95 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 PRSS33Q8NF86 280 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 SPTBN1Q01082 2364 aaKnown RBP10.16□□□□□ -0.78
HLCS-201ENST00000336648 DOPEY2Q9Y3R5 2298 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 GVINP1Q7Z2Y8 2422 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 TEX22C9J3V5 150 aa10.16□□□□□ -0.78
HLCS-201ENST00000336648 TRAV23DV6A0A075B6W5 121 aa10.15□□□□□ -0.78
HLCS-201ENST00000336648 C3orf22Q8N5N4 141 aa10.15□□□□□ -0.78
HLCS-201ENST00000336648 USP17L23D6RBM5 183 aa10.15□□□□□ -0.78
HLCS-201ENST00000336648 DIRC1Q969H9 104 aa10.15□□□□□ -0.78
HLCS-201ENST00000336648 TOMM6Q96B49 74 aa10.15□□□□□ -0.79
HLCS-201ENST00000336648 WI2-2373I1.2A0A1W2PRP0 233 aa10.15□□□□□ -0.79
HLCS-201ENST00000336648 C11orf86A6NJI1 115 aa10.15□□□□□ -0.79
HLCS-201ENST00000336648 FXYD2P54710 66 aa10.15□□□□□ -0.79
HLCS-201ENST00000336648 DEFB113Q30KQ7 82 aa10.15□□□□□ -0.79
HLCS-201ENST00000336648 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 CLEC2BQ92478 149 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 AJUBAQ96IF1 538 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 SCN5AQ14524 2016 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 TP53BP1Q12888 1972 aaPredicted RBP10.14□□□□□ -0.79
HLCS-201ENST00000336648 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 IGKV1-17P01599 117 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 CTSGP08311 255 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 E9PLD3 99 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 C1orf195Q5TG92 126 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 ABCA1O95477 2261 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 ANK1P16157 1881 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 POLEQ07864 2286 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
HLCS-201ENST00000336648 SBF1O95248 1867 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 RPL39LQ96EH5 51 aaKnown RBP10.13□□□□□ -0.79
HLCS-201ENST00000336648 Q9HAA7 133 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 ARFGEF3Q5TH69 2177 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 C20orf197Q8N268 126 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 RNF138Q8WVD3 245 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms