RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 NDUFA7O95182 113 aa4.94□□□□□ -1.62
CSMD1-201ENST00000335551 UBE2E2Q96LR5 201 aa4.94□□□□□ -1.62
CSMD1-201ENST00000335551 PRB2P02812 416 aaPredicted RBP4.94□□□□□ -1.62
CSMD1-201ENST00000335551 J3QKU1 62 aa4.94□□□□□ -1.62
CSMD1-201ENST00000335551 KLHL30-AS1Q8NEE0 82 aa4.94□□□□□ -1.62
CSMD1-201ENST00000335551 PATE3B3GLJ2 98 aa4.94□□□□□ -1.62
CSMD1-201ENST00000335551 LYPD3O95274 346 aa4.94□□□□□ -1.62
CSMD1-201ENST00000335551 C9orf106Q8NAJ2 232 aa4.94□□□□□ -1.62
CSMD1-201ENST00000335551 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
CSMD1-201ENST00000335551 IGHV1-69DA0A0B4J2H0 117 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 H3BRN7 92 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 ETV2O00321 342 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-201ENST00000335551 EFNA4P52798 201 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 PTH2Q96A98 100 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 NAV2Q8IVL1 2488 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 HIGD2BQ4VC39 106 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 C20orf204Q6ZNR8 217 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 NDUFA4L2Q9NRX3 87 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 RNF152Q8N8N0 203 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 C1orf195Q5TG92 126 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 RNF183Q96D59 192 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 MDS2Q8NDY4 140 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 APOC4P55056 127 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 MRPL36Q9P0J6 103 aaKnown RBP4.93□□□□□ -1.62
CSMD1-201ENST00000335551 CPAMD8Q8IZJ3 1885 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 WFDC2Q14508 124 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 FAM110DQ8TAY7 271 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-201ENST00000335551 GAFA1Q96PS6 74 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 KLK9Q9UKQ9 250 aa4.93□□□□□ -1.62
CSMD1-201ENST00000335551 IGHV1-18A0A0C4DH31 117 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 PSPNO60542 156 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 CD177Q8N6Q3 437 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 FANCD2OSQ96PS1 177 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 MRPL53Q96EL3 112 aaKnown RBP4.92□□□□□ -1.62
CSMD1-201ENST00000335551 ANGP03950 147 aaKnown RBP4.92□□□□□ -1.62
CSMD1-201ENST00000335551 DEFB105AQ8NG35 78 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 NDUFA4O00483 81 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 C11orf44Q8N8P7 122 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 JMJD1CQ15652 2540 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 BUB3O43684 328 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 SPINK13Q1W4C9 94 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 FXYD5Q96DB9 178 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 CFHR1Q03591 330 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 IGFL4Q6B9Z1 124 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 IGLV3-12A0A075B6K2 115 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 IGHV4-28A0A0C4DH34 117 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 LENEPQ9Y5L5 61 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 IGHV3-16A0A0C4DH30 117 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 IGKV1-16P04430 117 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 LYPD6BQ8NI32 183 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 TRAV4A0A0B4J268 109 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 A4D1N5 150 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 XCL1P47992 114 aa4.92□□□□□ -1.62
CSMD1-201ENST00000335551 PRR30Q53SZ7 412 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-201ENST00000335551 B4DSR2 109 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 Q6ZRM9 215 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 WIPF3A6NGB9 483 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 H3BUX3 64 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 PIFOQ8TCI5 191 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 FOXE3Q13461 319 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 ZNRF2Q8NHG8 242 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 FXYD2P54710 66 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 DAZ2Q13117 558 aaKnown RBP4.91□□□□□ -1.62
CSMD1-201ENST00000335551 ATP1A1-AS1Q5TC04 95 aa4.91□□□□□ -1.62
CSMD1-201ENST00000335551 DAZ4Q86SG3 579 aaKnown RBP4.91□□□□□ -1.62
CSMD1-201ENST00000335551 DAZ3Q9NR90 486 aaKnown RBP4.91□□□□□ -1.62
CSMD1-201ENST00000335551 RAI1Q7Z5J4 1906 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-201ENST00000335551 ANKRD17O75179 2603 aaKnown RBP4.91□□□□□ -1.62
CSMD1-201ENST00000335551 ZFP36L1Q07352 338 aaKnown RBP4.91□□□□□ -1.62
CSMD1-201ENST00000335551 GATA3P23771 443 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 UBE2AP49459 152 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 A6NED7 52 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 K7EN84 100 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 OVOL3O00110 214 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 IGKV4-1P06312 121 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 TIRAPP58753 221 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 ZNF833PQ6ZTB9 187 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 TGFBR3LH3BV60 316 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 EFNA2O43921 213 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 TFF1P04155 84 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 ZNF726P1Q15940 193 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 DEFB131AP59861 70 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 FAM110AQ9BQ89 295 aa4.9□□□□□ -1.62
CSMD1-201ENST00000335551 KLK5Q9Y337 293 aaPredicted RBP4.9□□□□□ -1.62
CSMD1-201ENST00000335551 CDPF1Q6NVV7 123 aa4.9□□□□□ -1.63
CSMD1-201ENST00000335551 K7EM74 188 aa4.9□□□□□ -1.63
CSMD1-201ENST00000335551 IGLV3-19P01714 112 aa4.9□□□□□ -1.63
CSMD1-201ENST00000335551 ZNF672Q499Z4 452 aaPredicted RBP4.9□□□□□ -1.63
CSMD1-201ENST00000335551 COL5A1P20908 1838 aaPredicted RBP4.9□□□□□ -1.63
CSMD1-201ENST00000335551 Q8N1Y9 231 aa4.9□□□□□ -1.63
CSMD1-201ENST00000335551 TRAV23DV6A0A075B6W5 121 aa4.9□□□□□ -1.63
CSMD1-201ENST00000335551 C5orf63A6NC05 138 aa4.89□□□□□ -1.63
CSMD1-201ENST00000335551 CSRP1P21291 193 aaKnown RBP4.89□□□□□ -1.63
CSMD1-201ENST00000335551 GATA4P43694 442 aa4.89□□□□□ -1.63
CSMD1-201ENST00000335551 VOPP1Q96AW1 172 aa4.89□□□□□ -1.63
CSMD1-201ENST00000335551 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.89□□□□□ -1.63
CSMD1-201ENST00000335551 SPRR3Q9UBC9 169 aa4.89□□□□□ -1.63
CSMD1-201ENST00000335551 IGKV1D-17A0A075B6S4 117 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms