RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RHOHQ15669 191 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 LRRK2Q5S007 2527 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 IGKV1OR2-108A0A075B7D4 117 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 FSTL3O95633 263 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 HSD52Q0P140 79 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 C4orf3Q8WVX3 66 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 TRBV12-3P01733 135 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 C21orf62-AS1Q17RA5 79 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 SMIM2Q9BVW6 85 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 MEGF9Q9H1U4 602 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 LOC105371267A0A1B0GV96 52 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 CD5LO43866 347 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 NPYP01303 97 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 CDSNQ15517 529 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 PGPEP1Q9NXJ5 209 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 A0A1B0GV90 55 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 VWC2LB2RUY7 222 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 ANGP03950 147 aaKnown RBP11.6□□□□□ -0.55
C9orf47-201ENST00000334490 WI2-2373I1.2A0A1W2PRP0 233 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
C9orf47-201ENST00000334490 TMEM61Q8N0U2 210 aa11.6□□□□□ -0.55
C9orf47-201ENST00000334490 ZNF493Q6ZR52 646 aa11.59□□□□□ -0.55
C9orf47-201ENST00000334490 TMEM141Q96I45 108 aa11.59□□□□□ -0.55
C9orf47-201ENST00000334490 K7EN84 100 aa11.59□□□□□ -0.55
C9orf47-201ENST00000334490 Q6YL49 198 aa11.59□□□□□ -0.55
C9orf47-201ENST00000334490 PMVKQ15126 192 aa11.59□□□□□ -0.55
C9orf47-201ENST00000334490 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.58□□□□□ -0.56
C9orf47-201ENST00000334490 TRAV25A0A0B4J276 109 aa11.58□□□□□ -0.56
C9orf47-201ENST00000334490 CRIP3Q6Q6R5 217 aa11.58□□□□□ -0.56
C9orf47-201ENST00000334490 Q6ZPA2 131 aa11.58□□□□□ -0.56
C9orf47-201ENST00000334490 STPG4Q8N801 248 aa11.58□□□□□ -0.56
C9orf47-201ENST00000334490 KMT2EQ8IZD2 1858 aa11.58□□□□□ -0.56
C9orf47-201ENST00000334490 SPART-AS1P0CW21 52 aa11.58□□□□□ -0.56
C9orf47-201ENST00000334490 KLF5Q13887 457 aaPredicted RBP11.58□□□□□ -0.56
C9orf47-201ENST00000334490 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
C9orf47-201ENST00000334490 DLX4Q92988 240 aaPredicted RBP11.58□□□□□ -0.56
C9orf47-201ENST00000334490 FAM167A-AS1Q96KT0 104 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 SIGLEC8Q9NYZ4 499 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 PRAC2D3DTV9 90 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 IGHG4P01861 327 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 ADAMTSL5Q6ZMM2 481 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 ZNF479Q96JC4 524 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 FN1P02751 2386 aaKnown RBP11.57□□□□□ -0.56
C9orf47-201ENST00000334490 PLA2G2AP14555 144 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 DEFB1P60022 68 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 RNF152Q8N8N0 203 aa11.57□□□□□ -0.56
C9orf47-201ENST00000334490 ESDP10768 282 aa11.56□□□□□ -0.56
C9orf47-201ENST00000334490 SMAD5-AS1Q9Y6J3 95 aa11.56□□□□□ -0.56
C9orf47-201ENST00000334490 CLPSL2Q6UWE3 100 aa11.56□□□□□ -0.56
C9orf47-201ENST00000334490 RMI2Q96E14 147 aa11.56□□□□□ -0.56
C9orf47-201ENST00000334490 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
C9orf47-201ENST00000334490 EPG5Q9HCE0 2579 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 IGHV1-24A0A0C4DH33 117 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 C16orf74Q96GX8 76 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 ARHGAP21Q5T5U3 1957 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 ATP5G1P05496 136 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 PFN2P35080 140 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 DEFB135Q30KP9 77 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 ARHGAP32A7KAX9 2087 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 LEPROTO15243 131 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 A0A087X0K7 114 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 INSL3P51460 131 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 BRWD1-AS2P59051 145 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 PYY3Q5JQD4 70 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 LYPD6BQ8NI32 183 aa11.55□□□□□ -0.56
C9orf47-201ENST00000334490 C1orf229Q6ZS94 237 aaPredicted RBP11.54□□□□□ -0.56
C9orf47-201ENST00000334490 ESM1Q9NQ30 184 aa11.54□□□□□ -0.56
C9orf47-201ENST00000334490 IGF1P05019 195 aa11.53□□□□□ -0.56
C9orf47-201ENST00000334490 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
C9orf47-201ENST00000334490 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
C9orf47-201ENST00000334490 ZNF48Q96MX3 618 aaPredicted RBP11.53□□□□□ -0.56
C9orf47-201ENST00000334490 LY6G6DO95868 133 aa11.52□□□□□ -0.56
C9orf47-201ENST00000334490 P0C879 139 aa11.52□□□□□ -0.56
C9orf47-201ENST00000334490 NUP210LQ5VU65 1888 aa11.52□□□□□ -0.57
C9orf47-201ENST00000334490 TEX48A0A1B0GUV7 120 aa11.52□□□□□ -0.57
C9orf47-201ENST00000334490 GYPEP15421 78 aa11.52□□□□□ -0.57
C9orf47-201ENST00000334490 NAA38Q9BRA0 125 aaKnown RBP11.52□□□□□ -0.57
C9orf47-201ENST00000334490 LRP4O75096 1905 aa11.52□□□□□ -0.57
C9orf47-201ENST00000334490 CRLF1O75462 422 aa11.52□□□□□ -0.57
C9orf47-201ENST00000334490 C10orf91Q5T1B1 145 aa11.52□□□□□ -0.57
C9orf47-201ENST00000334490 Q6ZQT7 251 aa11.52□□□□□ -0.57
C9orf47-201ENST00000334490 Q8N1Y9 231 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 Q9HAA7 133 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 IGKV2D-24A0A075B6R9 120 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 EREGO14944 169 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 DEFB4AO15263 64 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 MRPL23Q16540 153 aaKnown RBP11.51□□□□□ -0.57
C9orf47-201ENST00000334490 Q6ZSV7 163 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 H3BMM0 161 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 NDUFS6O75380 124 aaKnown RBP11.51□□□□□ -0.57
C9orf47-201ENST00000334490 NXPH4O95158 308 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 UBE2WQ96B02 151 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 GATA1P15976 413 aaPredicted RBP11.51□□□□□ -0.57
C9orf47-201ENST00000334490 C9orf47Q6ZRZ4 202 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 MSRB1Q9NZV6 116 aa11.51□□□□□ -0.57
C9orf47-201ENST00000334490 MPV17L2Q567V2 206 aa11.5□□□□□ -0.57
C9orf47-201ENST00000334490 SAMD5Q5TGI4 173 aa11.5□□□□□ -0.57
C9orf47-201ENST00000334490 NDUFA11Q86Y39 141 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms