RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CCL4L1Q8NHW4 92 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 A0A087WZ39 114 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 TRBV30A0A0K0K1B3 111 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGHV3-9P01782 118 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 ZNF883P0CG24 379 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 CSRP1P21291 193 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 NEXN-AS1Q8NBZ9 246 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 PRR15Q8IV56 129 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 V9GYV3 84 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 ELOF1P60002 83 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 PFN3P60673 137 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 NDUFA11Q86Y39 141 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 Q96M66 194 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 MUC7Q8TAX7 377 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 C6orf99Q4VX62 202 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGF2BP2-AS1Q96M15 143 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 SRSF3P84103 164 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 ZNF747Q9BV97 191 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGHV3-49A0A0A0MS15 119 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 WIPF3A6NGB9 483 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 AMELYQ99218 206 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 TMEM167AQ8TBQ9 72 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 H0YGG7 62 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 C11orf52Q96A22 123 aa4.81□□□□□ -1.64
CDC42BPA-201ENST00000334218 FNDC1Q4ZHG4 1894 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGHV3-72A0A0B4J1Y9 119 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 IMMP1LQ96LU5 166 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 COL4A5P29400 1685 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 OOSP1A8MZH6 123 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 E9PLN8 166 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 NHLRC4P0CG21 123 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 LINC00269Q8N2A0 174 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 Q8N6K4 173 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 Q9HAA7 133 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 A6NDX4 124 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 Q8N9W7 124 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 SPRY4Q9C004 299 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 ADCYAP1P18509 176 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 LOXP28300 417 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 SUPT4H1P63272 117 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 TRBV7-7A0A0K0K1E9 115 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 PYGO1Q9Y3Y4 419 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGKV3OR2-268A0A0C4DH90 116 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 CISD3P0C7P0 127 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGHV1-8P0DP01 117 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 LYZL1Q6UWQ5 148 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 KCNE3Q9Y6H6 103 aa4.8□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGLV5-45A0A087WSX0 123 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 WI2-2373I1.2A0A1W2PRP0 233 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 GGNQ86UU5 652 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 DEPPQ9NTK1 212 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 RNASE4P34096 147 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 ZFP36L1Q07352 338 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 TRGV2A0A075B6R0 118 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 ZNF73O43830 326 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 ZNF726P1Q15940 193 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 C15orf32Q32M92 178 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 FGFBP3Q8TAT2 258 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 MDFICQ9P1T7 246 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGHV3OR16-13A0A075B7E8 117 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGKV3D-11A0A0A0MRZ8 115 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGKV3-11P04433 115 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 VWCEQ96DN2 955 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 TEX49A0A1B0GTD5 131 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 PLA2G2FQ9BZM2 168 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 TMEM223A0PJW6 202 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 C4orf26Q17RF5 130 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 LST1O00453 97 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 TP73-AS1Q9UF72 201 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 PRR13Q9NZ81 148 aa4.79□□□□□ -1.64
CDC42BPA-201ENST00000334218 CR1P17927 2039 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 CCL24O00175 119 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 NDUFA4O00483 81 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 FGF22Q9HCT0 170 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 RNF7Q9UBF6 113 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 C11orf86A6NJI1 115 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 QRFPP83859 136 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 C9orf139Q6ZV77 190 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGLV3-32A0A0A0MS00 114 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 LENEPQ9Y5L5 61 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 H3BPC8 53 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 LINC00271P0C7V0 271 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 C3orf56Q8N813 242 aa4.78□□□□□ -1.64
CDC42BPA-201ENST00000334218 PSPHP1O15172 72 aa4.78□□□□□ -1.65
CDC42BPA-201ENST00000334218 CRIP2P52943 208 aaPredicted RBP4.78□□□□□ -1.65
CDC42BPA-201ENST00000334218 DEFB108AA8MXU0 73 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 C4orf51C9J302 202 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 NDUFB8O95169 186 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 UBE2D3P61077 147 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 PIGYQ3MUY2 71 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 ZFAND3Q9H8U3 227 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGHV3-73A0A0B4J1V6 119 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 TFF3Q07654 80 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 ENHOQ6UWT2 76 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 TMEM92Q6UXU6 159 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms