RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 DPF1Q92782 380 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 RNF185Q96GF1 192 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 HIVEP2P31629 2446 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 LOC389332A0A1B0GUA5 103 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 SMKR1H3BMG3 65 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 H3BVH4 76 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 S100A4P26447 101 aaKnown RBP6.52□□□□□ -1.37
LSAMP-201ENST00000333617 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-201ENST00000333617 TDRG1Q3Y452 100 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 TCTEX1D4Q5JR98 221 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 OR11H1Q8NG94 326 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 SIGLEC8Q9NYZ4 499 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 ZMAT5Q9UDW3 170 aaKnown RBP6.52□□□□□ -1.37
LSAMP-201ENST00000333617 PAM16Q9Y3D7 125 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 MAST4O15021 2626 aa6.52□□□□□ -1.37
LSAMP-201ENST00000333617 NOTCH2Q04721 2471 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 A0A0J9YX75 114 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 KLLNB2CW77 178 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 NCR2O95944 276 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 NPYP01303 97 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 LEPP41159 167 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 ASIPP42127 132 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 SCGB2A2Q13296 93 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 ANXA2RQ3ZCQ2 193 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 KLHL30-AS1Q8NEE0 82 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 OR1N2Q8NGR9 330 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 ODF3Q96PU9 254 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 NDUFAF3Q9BU61 184 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 TMEM70Q9BUB7 260 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 ESM1Q9NQ30 184 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 PEMTQ9UBM1 199 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 HSPB8Q9UJY1 196 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 LAMTOR2Q9Y2Q5 125 aa6.51□□□□□ -1.37
LSAMP-201ENST00000333617 TIMM8BQ9Y5J9 83 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-201ENST00000333617 NIPBLQ6KC79 2804 aaeCLIP6.5□□□□□ -1.37
LSAMP-201ENST00000333617 TCF21O43680 179 aa6.5□□□□□ -1.37
LSAMP-201ENST00000333617 EVI2AP22794 236 aa6.5□□□□□ -1.37
LSAMP-201ENST00000333617 C14orf144Q96I85 54 aa6.5□□□□□ -1.37
LSAMP-201ENST00000333617 C20orf144Q9BQM9 153 aa6.5□□□□□ -1.37
LSAMP-201ENST00000333617 MAP1LC3CQ9BXW4 147 aa6.5□□□□□ -1.37
LSAMP-201ENST00000333617 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
LSAMP-201ENST00000333617 SYS1-DBNDD2H3BUS1 97 aa6.49□□□□□ -1.37
LSAMP-201ENST00000333617 CRXO43186 299 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-201ENST00000333617 DUSP14O95147 198 aaKnown RBP6.49□□□□□ -1.37
LSAMP-201ENST00000333617 ADAMTSL5Q6ZMM2 481 aa6.49□□□□□ -1.37
LSAMP-201ENST00000333617 LINC00173Q6ZV60 143 aa6.49□□□□□ -1.37
LSAMP-201ENST00000333617 OR9G4Q8NGQ1 327 aa6.49□□□□□ -1.37
LSAMP-201ENST00000333617 MAP1LC3AQ9H492 121 aa6.49□□□□□ -1.37
LSAMP-201ENST00000333617 PHLDA3Q9Y5J5 127 aa6.49□□□□□ -1.37
LSAMP-201ENST00000333617 C20orf202A1L168 122 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 C7orf71A4D174 169 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 M0R381 172 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 GNRH2O43555 120 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 TNFRSF6BO95407 300 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 IGKV3-20P01619 116 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 PLA2G1BP04054 148 aaKnown RBP6.48□□□□□ -1.37
LSAMP-201ENST00000333617 TSPOP30536 169 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 SPATA45Q537H7 98 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 FAM159AQ6UWV7 190 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 FOXI2Q6ZQN5 318 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 LURAP1LQ8IV03 231 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 DYNLRB2Q8TF09 96 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 DUX3Q96PT4 197 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 SCRT2Q9NQ03 307 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 NSD1Q96L73 2696 aaPredicted RBP6.48□□□□□ -1.37
LSAMP-201ENST00000333617 OTOGQ6ZRI0 2925 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 NACAE9PAV3 2078 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 TRAV2A0A0B4J234 112 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 TRAV12-3A0A0B4J271 114 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 CDKN1BP46527 198 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 PET117Q6UWS5 81 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 ZNF705AQ6ZN79 300 aaPredicted RBP6.48□□□□□ -1.37
LSAMP-201ENST00000333617 SPATA12Q7Z6I5 190 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 ATOH7Q8N100 152 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 OR2K2Q8NGT1 345 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 DLX4Q92988 240 aaPredicted RBP6.48□□□□□ -1.37
LSAMP-201ENST00000333617 MIEN1Q9BRT3 115 aa6.48□□□□□ -1.37
LSAMP-201ENST00000333617 TRAV9-2A0A087WT02 112 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 A0A096LNJ9 63 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 LINC01546A6NGU7 62 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 OR4C46A6NHA9 309 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 HBDP02042 147 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 RNASE3P12724 160 aaKnown RBP6.47□□□□□ -1.37
LSAMP-201ENST00000333617 GATA1P15976 413 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-201ENST00000333617 MRAP2Q96G30 205 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 ZNF747Q9BV97 191 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 DPH3P1Q9H4G8 78 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 C16orf95Q9H693 158 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 NXT2Q9NPJ8 142 aaKnown RBP6.47□□□□□ -1.37
LSAMP-201ENST00000333617 TMEM160Q9NX00 188 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 JMJD1CQ15652 2540 aa6.47□□□□□ -1.37
LSAMP-201ENST00000333617 NOTCH3Q9UM47 2321 aa6.46□□□□□ -1.37
LSAMP-201ENST00000333617 TRAV12-2A0A075B6T6 113 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 H0Y8G0 127 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 CD7P09564 240 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 CD28P10747 220 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 HIST2H2BDQ6DRA6 164 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms