RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 CSTL1Q9H114 145 aa8.86□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 K7EMI3 77 aa8.86□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 GPHB5Q86YW7 130 aa8.86□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 CD7P09564 240 aa8.85□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 SLC25A16P16260 332 aa8.85□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 RASL10AQ92737 203 aa8.85□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 JMJD8Q96S16 334 aa8.85□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 MED14OSP0DP75 135 aa8.85□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 SCGB1D4Q6XE38 83 aa8.85□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 CEND1Q8N111 149 aa8.85□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 KIR2DL4Q99706 377 aa8.85□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 SOCS3O14543 225 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 IGKV3-20P01619 116 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 HLA-DRB4P13762 266 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 CYSLTR1Q9Y271 337 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 HLA-DRB4X5D2U9 266 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 TRAV12-1A0A0B4J245 112 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 TRAV12-3A0A0B4J271 114 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 FAM74A4Q5TZK3 123 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 K7ERJ3 54 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 ZNF688P0C7X2 276 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 Q6ZS46 218 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 TOMM6Q96B49 74 aa8.84□□□□□ -0.99
CSPG4P4Y-201ENST00000333235 RPL24P83731 157 aaKnown RBP8.83□□□□□ -1
CSPG4P4Y-201ENST00000333235 BRI3O95415 125 aa8.83□□□□□ -1
CSPG4P4Y-201ENST00000333235 TMEM95Q3KNT9 176 aa8.83□□□□□ -1
CSPG4P4Y-201ENST00000333235 CACNA1AO00555 2505 aa8.83□□□□□ -1
CSPG4P4Y-201ENST00000333235 ACACBO00763 2458 aa8.83□□□□□ -1
CSPG4P4Y-201ENST00000333235 A0A087WWL8 130 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 K7EMT4 169 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 HERVK_113P61574 105 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 COTL1Q14019 142 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 TAL2Q16559 108 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 NEGR1Q7Z3B1 354 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 SYT8Q8NBV8 401 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 IGLV1-40P01703 118 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 RNASE3P12724 160 aaKnown RBP8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 GATA3P23771 443 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 UFSP1Q6NVU6 142 aa8.82□□□□□ -1
CSPG4P4Y-201ENST00000333235 MAPKAPK5-AS1Q8N8E1 139 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 DEFB104AQ8WTQ1 72 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 PIEZO1Q92508 2521 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 PKD1L2Q7Z442 2459 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 MYMXA0A1B0GTQ4 84 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 PRSS29PA6NIE9 313 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 LINC01549A6NIU2 74 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 ZNF479Q96JC4 524 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 TM2D2Q9BX73 214 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 COL12A1Q99715 3063 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 VCYO14598 125 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 DSCR9P59020 149 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 ZNF56Q15929 161 aa8.81□□□□□ -1
CSPG4P4Y-201ENST00000333235 ZNF815PA8K554 130 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 IGHV4-59P01825 116 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 NEXN-AS1Q8NBZ9 246 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 BAALCQ8WXS3 180 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 DOPEY2Q9Y3R5 2298 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 SAP30O75446 220 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 PAPPA-AS1Q5QFB9 102 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 TP53TG1Q9Y2A0 90 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 TMEM238LA0A1B0GVL6 79 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 A6NJY4 79 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 TGFAP01135 160 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 CD300EQ496F6 205 aaPredicted RBP8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 PRADC1Q9BSG0 188 aa8.8□□□□□ -1
CSPG4P4Y-201ENST00000333235 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 USP9YO00507 2555 aaPredicted RBP8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 ZNF256Q9Y2P7 627 aaPredicted RBP8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 KLLNB2CW77 178 aa8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 DEFB112Q30KQ8 113 aa8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 TRAV12-2A0A075B6T6 113 aa8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 DUSP14O95147 198 aaKnown RBP8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 FAM19A4Q96LR4 140 aa8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 MYO18BQ8IUG5 2567 aa8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 FAM208BQ5VWN6 2430 aa8.79□□□□□ -1
CSPG4P4Y-201ENST00000333235 SDHAF1A6NFY7 115 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 AVPP01185 164 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 SYNJ2BPP57105 145 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 C12orf74Q32Q52 190 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 APRG1Q8IVJ8 170 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 LINC01356Q8N9X3 169 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 JPT2Q9H910 190 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 EMP1P54849 157 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 TMEM170BQ5T4T1 132 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 SUMO4Q6EEV6 95 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 HTN1P15515 57 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 EDN2P20800 178 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 DCANP1Q8TF63 244 aa8.78□□□□□ -1
CSPG4P4Y-201ENST00000333235 E9PLD3 99 aa8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 J3QR89 54 aa8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 PSMB8P28062 276 aa8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 PMVKQ15126 192 aa8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 SPINK13Q1W4C9 94 aa8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 ZFP2Q6ZN57 461 aa8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 NRGNQ92686 78 aa8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 DOPEY1Q5JWR5 2465 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms