RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 C18orf15Q96N68 181 aa12.09□□□□□ -0.47
PDGFB-201ENST00000331163 WI2-2373I1.2A0A1W2PRP0 233 aa12.08□□□□□ -0.48
PDGFB-201ENST00000331163 PLP1P60201 277 aa12.08□□□□□ -0.48
PDGFB-201ENST00000331163 TMEM190Q8WZ59 177 aa12.08□□□□□ -0.48
PDGFB-201ENST00000331163 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
PDGFB-201ENST00000331163 PEMTQ9UBM1 199 aa12.08□□□□□ -0.48
PDGFB-201ENST00000331163 TMEM61Q8N0U2 210 aa12.08□□□□□ -0.48
PDGFB-201ENST00000331163 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.08□□□□□ -0.48
PDGFB-201ENST00000331163 TENM1Q9UKZ4 2725 aa12.08□□□□□ -0.48
PDGFB-201ENST00000331163 OVOL1O14753 267 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 KLF5Q13887 457 aaPredicted RBP12.07□□□□□ -0.48
PDGFB-201ENST00000331163 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 TWIST1Q15672 202 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 GTSF1LQ9H1H1 148 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 ZFAND3Q9H8U3 227 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 ARMS2P0C7Q2 107 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 GCSHP23434 173 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 FAM162BQ5T6X4 162 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 Q6ZQT7 251 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 OR10AG1Q8NH19 301 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 MS4A6AQ9H2W1 248 aa12.07□□□□□ -0.48
PDGFB-201ENST00000331163 CACNG7P62955 275 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 SMAGPQ0VAQ4 97 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 SPANXN1Q5VSR9 72 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 MTURNQ8N3F0 131 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 KLK9Q9UKQ9 250 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 SMAD5-AS1Q9Y6J3 95 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 OR2K2Q8NGT1 345 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 LINC00477Q96M19 166 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 SPCS1Q9Y6A9 102 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 PRM2P04554 102 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 CD300EQ496F6 205 aaPredicted RBP12.06□□□□□ -0.48
PDGFB-201ENST00000331163 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
PDGFB-201ENST00000331163 MGPP08493 103 aa12.05□□□□□ -0.48
PDGFB-201ENST00000331163 PSG3Q16557 428 aa12.05□□□□□ -0.48
PDGFB-201ENST00000331163 HILS1P60008 231 aa12.05□□□□□ -0.48
PDGFB-201ENST00000331163 KRTAP1-1Q07627 177 aa12.05□□□□□ -0.48
PDGFB-201ENST00000331163 AGPAT4-IT1Q9H0P7 198 aa12.05□□□□□ -0.48
PDGFB-201ENST00000331163 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
PDGFB-201ENST00000331163 IFI27P40305 119 aaPredicted RBP12.05□□□□□ -0.48
PDGFB-201ENST00000331163 Q86TA4 180 aa12.05□□□□□ -0.48
PDGFB-201ENST00000331163 FCER1GP30273 86 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 PET117Q6UWS5 81 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 OR9G4Q8NGQ1 327 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 FMC1Q96HJ9 113 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 SLC50A1Q9BRV3 221 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 CLPSL1A2RUU4 121 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 A6NDN8 102 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 IGLV1-40P01703 118 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
PDGFB-201ENST00000331163 CHCHD1Q96BP2 118 aaKnown RBP12.04□□□□□ -0.48
PDGFB-201ENST00000331163 TMEM213A2RRL7 107 aa12.03□□□□□ -0.48
PDGFB-201ENST00000331163 SMKR1H3BMG3 65 aa12.03□□□□□ -0.48
PDGFB-201ENST00000331163 H3BVH4 76 aa12.03□□□□□ -0.48
PDGFB-201ENST00000331163 TSSC4Q9Y5U2 329 aaPredicted RBP12.03□□□□□ -0.48
PDGFB-201ENST00000331163 CD7P09564 240 aa12.03□□□□□ -0.48
PDGFB-201ENST00000331163 FAM231DQ6ZW35 169 aa12.03□□□□□ -0.48
PDGFB-201ENST00000331163 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
PDGFB-201ENST00000331163 RAX2Q96IS3 184 aa12.03□□□□□ -0.48
PDGFB-201ENST00000331163 IGHV3-73A0A0B4J1V6 119 aa12.02□□□□□ -0.49
PDGFB-201ENST00000331163 A0A1B0GXF2 115 aa12.02□□□□□ -0.49
PDGFB-201ENST00000331163 SH2D1AO60880 128 aa12.02□□□□□ -0.49
PDGFB-201ENST00000331163 COX8AP10176 69 aa12.02□□□□□ -0.49
PDGFB-201ENST00000331163 ATP5L2Q7Z4Y8 100 aa12.02□□□□□ -0.49
PDGFB-201ENST00000331163 C2orf91Q6ZV80 131 aa12.02□□□□□ -0.49
PDGFB-201ENST00000331163 C20orf173Q96LM9 149 aa12.02□□□□□ -0.49
PDGFB-201ENST00000331163 A0A1B0GUT8 65 aa12.01□□□□□ -0.49
PDGFB-201ENST00000331163 K7ERJ3 54 aa12.01□□□□□ -0.49
PDGFB-201ENST00000331163 FAM159AQ6UWV7 190 aa12.01□□□□□ -0.49
PDGFB-201ENST00000331163 STHQ8IWL8 128 aa12.01□□□□□ -0.49
PDGFB-201ENST00000331163 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
PDGFB-201ENST00000331163 SAMD13Q5VXD3 122 aa12□□□□□ -0.49
PDGFB-201ENST00000331163 LINC01587Q99440 93 aa12□□□□□ -0.49
PDGFB-201ENST00000331163 PHLDA3Q9Y5J5 127 aa12□□□□□ -0.49
PDGFB-201ENST00000331163 VWFP04275 2813 aa12□□□□□ -0.49
PDGFB-201ENST00000331163 D6R8Y8 96 aa12□□□□□ -0.49
PDGFB-201ENST00000331163 C9orf139Q6ZV77 190 aa12□□□□□ -0.49
PDGFB-201ENST00000331163 PRR25Q96S07 402 aa12□□□□□ -0.49
PDGFB-201ENST00000331163 ZNF747Q9BV97 191 aa12□□□□□ -0.49
PDGFB-201ENST00000331163 FABP5P3A8MUU1 101 aa11.99□□□□□ -0.49
PDGFB-201ENST00000331163 H3BUA1 57 aa11.99□□□□□ -0.49
PDGFB-201ENST00000331163 PRB2P02812 416 aaPredicted RBP11.99□□□□□ -0.49
PDGFB-201ENST00000331163 RNASE1P07998 156 aaKnown RBP11.99□□□□□ -0.49
PDGFB-201ENST00000331163 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
PDGFB-201ENST00000331163 FABP2P12104 132 aa11.99□□□□□ -0.49
PDGFB-201ENST00000331163 TMEM14CQ9P0S9 112 aa11.99□□□□□ -0.49
PDGFB-201ENST00000331163 C9orf118A6NHY6 69 aa11.98□□□□□ -0.49
PDGFB-201ENST00000331163 CRLF1O75462 422 aa11.98□□□□□ -0.49
PDGFB-201ENST00000331163 SEC11AP67812 179 aa11.98□□□□□ -0.49
PDGFB-201ENST00000331163 RIGQ13278 110 aa11.98□□□□□ -0.49
PDGFB-201ENST00000331163 FSHBP01225 129 aa11.98□□□□□ -0.49
PDGFB-201ENST00000331163 PRSS1P07477 247 aa11.98□□□□□ -0.49
PDGFB-201ENST00000331163 LYZL1Q6UWQ5 148 aa11.98□□□□□ -0.49
PDGFB-201ENST00000331163 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
PDGFB-201ENST00000331163 ZNF80P51504 273 aaPredicted RBP11.97□□□□□ -0.49
PDGFB-201ENST00000331163 GNRH2O43555 120 aa11.97□□□□□ -0.49
PDGFB-201ENST00000331163 GPHB5Q86YW7 130 aa11.97□□□□□ -0.49
PDGFB-201ENST00000331163 NHP2Q9NX24 153 aaKnown RBP11.97□□□□□ -0.49
PDGFB-201ENST00000331163 CRXO43186 299 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms