RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 BAALCQ8WXS3 180 aa11.02□□□□□ -0.64
SNX20-202ENST00000330943 RASL10AQ92737 203 aa11.02□□□□□ -0.64
SNX20-202ENST00000330943 LRRK2Q5S007 2527 aa11.02□□□□□ -0.65
SNX20-202ENST00000330943 C2orf66Q6UXQ4 117 aa11.02□□□□□ -0.65
SNX20-202ENST00000330943 SLC25A16P16260 332 aa11.02□□□□□ -0.65
SNX20-202ENST00000330943 NFE4Q86UQ8 179 aa11.02□□□□□ -0.65
SNX20-202ENST00000330943 Q8N9W7 124 aa11.02□□□□□ -0.65
SNX20-202ENST00000330943 PRSS29PA6NIE9 313 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 TSPAN13O95857 204 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 IGF1P05019 195 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 ZFP2Q6ZN57 461 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 C9orf47Q6ZRZ4 202 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
SNX20-202ENST00000330943 TIMD4Q96H15 378 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 CCDC140Q96MF4 163 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 MGPP08493 103 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
SNX20-202ENST00000330943 GLMPQ8WWB7 406 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 PTH2Q96A98 100 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 CDIP1Q9H305 208 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 CSPG4Q6UVK1 2322 aa11.01□□□□□ -0.65
SNX20-202ENST00000330943 ATP6V0E1O15342 81 aa11□□□□□ -0.65
SNX20-202ENST00000330943 KLHL30-AS1Q8NEE0 82 aa11□□□□□ -0.65
SNX20-202ENST00000330943 METTL26Q96S19 204 aa11□□□□□ -0.65
SNX20-202ENST00000330943 EPG5Q9HCE0 2579 aa11□□□□□ -0.65
SNX20-202ENST00000330943 TRAV26-1A0A087WT03 109 aa11□□□□□ -0.65
SNX20-202ENST00000330943 ATP6V0E2Q8NHE4 81 aa11□□□□□ -0.65
SNX20-202ENST00000330943 C16orf92Q96LL3 132 aa11□□□□□ -0.65
SNX20-202ENST00000330943 ZANQ9Y493 2812 aa11□□□□□ -0.65
SNX20-202ENST00000330943 SPINK8P0C7L1 97 aa10.99□□□□□ -0.65
SNX20-202ENST00000330943 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
SNX20-202ENST00000330943 GEMIN7Q9H840 131 aaKnown RBP10.99□□□□□ -0.65
SNX20-202ENST00000330943 IGSF10Q6WRI0 2623 aa10.99□□□□□ -0.65
SNX20-202ENST00000330943 G3V318 75 aa10.99□□□□□ -0.65
SNX20-202ENST00000330943 UBE2D1P51668 147 aa10.99□□□□□ -0.65
SNX20-202ENST00000330943 FHL3Q13643 280 aa10.99□□□□□ -0.65
SNX20-202ENST00000330943 EBI3Q14213 229 aa10.99□□□□□ -0.65
SNX20-202ENST00000330943 MRPL53Q96EL3 112 aaKnown RBP10.99□□□□□ -0.65
SNX20-202ENST00000330943 MT-ATP8P03928 68 aa10.98□□□□□ -0.65
SNX20-202ENST00000330943 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
SNX20-202ENST00000330943 EMP1P54849 157 aa10.98□□□□□ -0.65
SNX20-202ENST00000330943 TLN2Q9Y4G6 2542 aa10.98□□□□□ -0.65
SNX20-202ENST00000330943 COX6B1P14854 86 aa10.98□□□□□ -0.65
SNX20-202ENST00000330943 DEFB104AQ8WTQ1 72 aa10.98□□□□□ -0.65
SNX20-202ENST00000330943 PHLDA3Q9Y5J5 127 aa10.98□□□□□ -0.65
SNX20-202ENST00000330943 ABCA12Q86UK0 2595 aa10.97□□□□□ -0.65
SNX20-202ENST00000330943 LINC01548A6NM66 108 aa10.97□□□□□ -0.65
SNX20-202ENST00000330943 OOSP1A8MZH6 123 aa10.97□□□□□ -0.65
SNX20-202ENST00000330943 RNF223E7ERA6 249 aa10.97□□□□□ -0.65
SNX20-202ENST00000330943 TGFAP01135 160 aa10.97□□□□□ -0.65
SNX20-202ENST00000330943 LY6DQ14210 128 aa10.97□□□□□ -0.65
SNX20-202ENST00000330943 DUSP14O95147 198 aaKnown RBP10.96□□□□□ -0.65
SNX20-202ENST00000330943 CD7P09564 240 aa10.96□□□□□ -0.65
SNX20-202ENST00000330943 CRYBA4P53673 196 aa10.96□□□□□ -0.65
SNX20-202ENST00000330943 C20orf173Q96LM9 149 aa10.96□□□□□ -0.65
SNX20-202ENST00000330943 XGP55808 180 aa10.96□□□□□ -0.66
SNX20-202ENST00000330943 DEFB1P60022 68 aa10.96□□□□□ -0.66
SNX20-202ENST00000330943 UBE2D3P61077 147 aa10.96□□□□□ -0.66
SNX20-202ENST00000330943 UBE2D2P62837 147 aa10.96□□□□□ -0.66
SNX20-202ENST00000330943 MINOS1Q5TGZ0 78 aa10.96□□□□□ -0.66
SNX20-202ENST00000330943 EEF1AKMT3Q96AZ1 226 aa10.96□□□□□ -0.66
SNX20-202ENST00000330943 MINOS1-NBL1R4GNA1 71 aa10.96□□□□□ -0.66
SNX20-202ENST00000330943 C11orf86A6NJI1 115 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 K7ENP7 123 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 CCL21O00585 134 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 ASIPP42127 132 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 Q6ZUT4 128 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 NDUFA11Q86Y39 141 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 CARD19Q96LW7 228 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 TCL1BO95988 128 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 LYRM7Q5U5X0 104 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 ZFAND2AQ8N6M9 145 aa10.95□□□□□ -0.66
SNX20-202ENST00000330943 CRYGDP07320 174 aa10.94□□□□□ -0.66
SNX20-202ENST00000330943 ANXA2RQ3ZCQ2 193 aa10.94□□□□□ -0.66
SNX20-202ENST00000330943 TEN1Q86WV5 123 aa10.94□□□□□ -0.66
SNX20-202ENST00000330943 PPDPFLQ8WWR9 84 aa10.94□□□□□ -0.66
SNX20-202ENST00000330943 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
SNX20-202ENST00000330943 A0A0J9YY99 117 aa10.93□□□□□ -0.66
SNX20-202ENST00000330943 ZFP36P26651 326 aaKnown RBP10.93□□□□□ -0.66
SNX20-202ENST00000330943 C9orf139Q6ZV77 190 aa10.93□□□□□ -0.66
SNX20-202ENST00000330943 CENPVL3A0A0U1RRI6 287 aa10.93□□□□□ -0.66
SNX20-202ENST00000330943 HERVK_113P61574 105 aa10.93□□□□□ -0.66
SNX20-202ENST00000330943 Q6ZS46 218 aa10.93□□□□□ -0.66
SNX20-202ENST00000330943 TP53TG1Q9Y2A0 90 aa10.93□□□□□ -0.66
SNX20-202ENST00000330943 LENEPQ9Y5L5 61 aa10.93□□□□□ -0.66
SNX20-202ENST00000330943 U3KQE9 123 aa10.93□□□□□ -0.66
SNX20-202ENST00000330943 IGLV4-69A0A075B6H9 119 aa10.92□□□□□ -0.66
SNX20-202ENST00000330943 TRBV7-1A0A0A6YYK4 115 aa10.92□□□□□ -0.66
SNX20-202ENST00000330943 OR10J6PQ8NGY7 276 aa10.92□□□□□ -0.66
SNX20-202ENST00000330943 ITLN2Q8WWU7 325 aaPredicted RBP10.92□□□□□ -0.66
SNX20-202ENST00000330943 GNRH2O43555 120 aa10.92□□□□□ -0.66
SNX20-202ENST00000330943 TSHBP01222 138 aa10.92□□□□□ -0.66
SNX20-202ENST00000330943 RNASE4P34096 147 aaKnown RBP10.92□□□□□ -0.66
SNX20-202ENST00000330943 C1orf122Q6ZSJ8 110 aa10.92□□□□□ -0.66
SNX20-202ENST00000330943 GPHB5Q86YW7 130 aa10.91□□□□□ -0.66
SNX20-202ENST00000330943 LINC00477Q96M19 166 aa10.91□□□□□ -0.66
SNX20-202ENST00000330943 A8MWV9 139 aa10.91□□□□□ -0.66
SNX20-202ENST00000330943 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
SNX20-202ENST00000330943 CFC1P0CG37 223 aa10.91□□□□□ -0.66
SNX20-202ENST00000330943 ARL3P36405 182 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms