RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 A0A0G2JNJ9 132 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 IGIPA6NJ69 53 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 IGF1P05019 195 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 IFITM1P13164 125 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 PAPPA-AS1Q5QFB9 102 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 GPHB5Q86YW7 130 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
CCDC60-201ENST00000327554 RAX2Q96IS3 184 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 Q9UFV3 132 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 ADGRG4Q8IZF6 3080 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 HERV-K104P63124 156 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 LY6G5BQ8NDX9 201 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 FAM57AQ8TBR7 257 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
CCDC60-201ENST00000327554 ODF3Q96PU9 254 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 WNK2Q9Y3S1 2297 aa9.68□□□□□ -0.86
CCDC60-201ENST00000327554 A4D1N5 150 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 MGPP08493 103 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 RPL32P62910 135 aaKnown RBP9.67□□□□□ -0.86
CCDC60-201ENST00000327554 TTC32Q5I0X7 151 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 TRIOBPQ9H2D6 2365 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 IGHV1-69DA0A0B4J2H0 117 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 P0DMU3 169 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 FAM231AP0DMU4 169 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 FAM231CP0DMU5 169 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 PMVKQ15126 192 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 LINC01600Q96MT4 127 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 TP53TG1Q9Y2A0 90 aa9.67□□□□□ -0.86
CCDC60-201ENST00000327554 IGHV3-49A0A0A0MS15 119 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 ODF3BA8MYP8 253 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 CLEC3BP05452 202 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 ELANEP08246 267 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 C15orf32Q32M92 178 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 Q8N6K4 173 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 PCNX1Q96RV3 2341 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 IGHV7-81A0A0B4J1V7 117 aa9.66□□□□□ -0.86
CCDC60-201ENST00000327554 J3QQQ9 107 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 RPL13AP40429 203 aaKnown RBP9.65□□□□□ -0.86
CCDC60-201ENST00000327554 IGFL3Q6UXB1 125 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 J3KRW8 73 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 LINC01620Q4KN68 170 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 FAM159AQ6UWV7 190 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 PHLDA3Q9Y5J5 127 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 MUC4Q99102 2169 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 CEP250Q9BV73 2442 aa9.65□□□□□ -0.86
CCDC60-201ENST00000327554 A0A0B4J2C4 111 aa9.64□□□□□ -0.87
CCDC60-201ENST00000327554 TEX49A0A1B0GTD5 131 aa9.64□□□□□ -0.87
CCDC60-201ENST00000327554 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
CCDC60-201ENST00000327554 ZFAND2AQ8N6M9 145 aa9.64□□□□□ -0.87
CCDC60-201ENST00000327554 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
CCDC60-201ENST00000327554 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
CCDC60-201ENST00000327554 C15orf53Q8NAA6 179 aa9.64□□□□□ -0.87
CCDC60-201ENST00000327554 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
CCDC60-201ENST00000327554 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
CCDC60-201ENST00000327554 TRAV8-4A0A0B4J246 113 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 H7C2G1 150 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 PPP1R17O96001 155 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 S100A4P26447 101 aaKnown RBP9.63□□□□□ -0.87
CCDC60-201ENST00000327554 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
CCDC60-201ENST00000327554 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 CNOT1A5YKK6 2376 aaKnown RBP9.63□□□□□ -0.87
CCDC60-201ENST00000327554 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
CCDC60-201ENST00000327554 LINC00315P59091 139 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 ATXN8Q156A1 80 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 ITLN2Q8WWU7 325 aaPredicted RBP9.63□□□□□ -0.87
CCDC60-201ENST00000327554 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 TIMM17AQ99595 171 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 U3KQE9 123 aa9.63□□□□□ -0.87
CCDC60-201ENST00000327554 B9A039 149 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
CCDC60-201ENST00000327554 CLEC19AQ6UXS0 136 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 KIF25-AS1Q9Y6Z4 181 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 DCHS2Q6V1P9 2916 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 TRAV21A0A0B4J279 112 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 MED14OSP0DP75 135 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 ARL3P36405 182 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 TCF15Q12870 199 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 EBI3Q14213 229 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 KLK9Q2XQG4 91 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 PRR30Q53SZ7 412 aaPredicted RBP9.62□□□□□ -0.87
CCDC60-201ENST00000327554 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 METTL26Q96S19 204 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 KLK9Q9UKQ9 250 aa9.62□□□□□ -0.87
CCDC60-201ENST00000327554 IGHV4OR15-8A0A075B7B6 117 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 A0A087WW49 117 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 RNASE3P12724 160 aaKnown RBP9.61□□□□□ -0.87
CCDC60-201ENST00000327554 C16orf92Q96LL3 132 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 GNRH2O43555 120 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 IGHV4-39P01824 125 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 Q8N9W7 124 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 OR10J6PQ8NGY7 276 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
CCDC60-201ENST00000327554 H3BMM0 161 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms