RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 IGKV3-7A0A075B6H7 116 aa11.09□□□□□ -0.63
SSBP3-201ENST00000326956 TRAV41A0A0B4J266 112 aa11.09□□□□□ -0.63
SSBP3-201ENST00000326956 KLK9Q2XQG4 91 aa11.09□□□□□ -0.63
SSBP3-201ENST00000326956 ZNF418Q8TF45 676 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-201ENST00000326956 KLK9Q9UKQ9 250 aa11.09□□□□□ -0.63
SSBP3-201ENST00000326956 FOXC1Q12948 553 aa11.09□□□□□ -0.63
SSBP3-201ENST00000326956 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
SSBP3-201ENST00000326956 TMEM219Q86XT9 240 aa11.09□□□□□ -0.63
SSBP3-201ENST00000326956 K7ENP7 123 aa11.08□□□□□ -0.63
SSBP3-201ENST00000326956 AKAP6Q13023 2319 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 FAM223BA6NKX1 122 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 FAM223AQ8IWN6 122 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 KLHL30-AS1Q8NEE0 82 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 ITLN2Q8WWU7 325 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-201ENST00000326956 PLEKHB2Q96CS7 222 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 C1QTNF4Q9BXJ3 329 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 GNRH2O43555 120 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 DUSP14O95147 198 aaKnown RBP11.08□□□□□ -0.64
SSBP3-201ENST00000326956 EMP1P54849 157 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 DEFB1P60022 68 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 FOXI1Q12951 378 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 CDSNQ15517 529 aa11.08□□□□□ -0.64
SSBP3-201ENST00000326956 F5H697 171 aa11.07□□□□□ -0.64
SSBP3-201ENST00000326956 NPFFO15130 113 aa11.07□□□□□ -0.64
SSBP3-201ENST00000326956 C5orf56Q8N8D9 126 aa11.07□□□□□ -0.64
SSBP3-201ENST00000326956 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
SSBP3-201ENST00000326956 TP53TG1Q9Y2A0 90 aa11.07□□□□□ -0.64
SSBP3-201ENST00000326956 MED14OSP0DP75 135 aa11.06□□□□□ -0.64
SSBP3-201ENST00000326956 CKS1BP61024 79 aa11.06□□□□□ -0.64
SSBP3-201ENST00000326956 TCF15Q12870 199 aa11.06□□□□□ -0.64
SSBP3-201ENST00000326956 DEFB104AQ8WTQ1 72 aa11.06□□□□□ -0.64
SSBP3-201ENST00000326956 KIR2DL4Q99706 377 aa11.06□□□□□ -0.64
SSBP3-201ENST00000326956 CSMD1Q96PZ7 3565 aa11.06□□□□□ -0.64
SSBP3-201ENST00000326956 TMEM170BQ5T4T1 132 aa11.06□□□□□ -0.64
SSBP3-201ENST00000326956 CFAP126Q5VTH2 177 aa11.06□□□□□ -0.64
SSBP3-201ENST00000326956 F6UB75 175 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 TSPAN13O95857 204 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 SCGB1C2P0DMR2 95 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 ATP6V0E2Q8NHE4 81 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 MOB4Q9Y3A3 225 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 IGHV1-69DA0A0B4J2H0 117 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 C11orf86A6NJI1 115 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 ADORA2A-AS1P86434 159 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 CEP295Q9C0D2 2601 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 NDUFA4O00483 81 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 UBE2D1P51668 147 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 PMVKQ15126 192 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 AJUBAQ96IF1 538 aa11.05□□□□□ -0.64
SSBP3-201ENST00000326956 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
SSBP3-201ENST00000326956 FAM159AQ6UWV7 190 aa11.04□□□□□ -0.64
SSBP3-201ENST00000326956 ZFP2Q6ZN57 461 aa11.04□□□□□ -0.64
SSBP3-201ENST00000326956 UBTD1Q9HAC8 227 aa11.04□□□□□ -0.64
SSBP3-201ENST00000326956 COL6A6A6NMZ7 2263 aa11.04□□□□□ -0.64
SSBP3-201ENST00000326956 IGHV3-11P01762 117 aa11.03□□□□□ -0.64
SSBP3-201ENST00000326956 GPHB5Q86YW7 130 aa11.03□□□□□ -0.64
SSBP3-201ENST00000326956 VCYO14598 125 aa11.03□□□□□ -0.64
SSBP3-201ENST00000326956 TRBV12-3P01733 135 aa11.03□□□□□ -0.64
SSBP3-201ENST00000326956 RNASE3P12724 160 aaKnown RBP11.03□□□□□ -0.64
SSBP3-201ENST00000326956 COX6B1P14854 86 aa11.03□□□□□ -0.64
SSBP3-201ENST00000326956 DCHS2Q6V1P9 2916 aa11.02□□□□□ -0.64
SSBP3-201ENST00000326956 BSNQ9UPA5 3926 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 NDUFA11Q86Y39 141 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 TMEM141Q96I45 108 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 BPESC1Q9GZL8 116 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 TRBV20-1A0A075B6N2 111 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 A0A0J9YY99 117 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 CRYGDP07320 174 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 SPINK8P0C7L1 97 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 LGALS3P17931 250 aaKnown RBP11.02□□□□□ -0.65
SSBP3-201ENST00000326956 PPDPFLQ8WWR9 84 aa11.02□□□□□ -0.65
SSBP3-201ENST00000326956 A0A087WWL8 130 aa11.01□□□□□ -0.65
SSBP3-201ENST00000326956 TGFAP01135 160 aa11.01□□□□□ -0.65
SSBP3-201ENST00000326956 CD7P09564 240 aa11.01□□□□□ -0.65
SSBP3-201ENST00000326956 PF4V1P10720 104 aa11.01□□□□□ -0.65
SSBP3-201ENST00000326956 SMCPP49901 116 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-201ENST00000326956 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
SSBP3-201ENST00000326956 TCTEX1D4Q5JR98 221 aa11.01□□□□□ -0.65
SSBP3-201ENST00000326956 PTH2Q96A98 100 aa11.01□□□□□ -0.65
SSBP3-201ENST00000326956 A8MWV9 139 aa11.01□□□□□ -0.65
SSBP3-201ENST00000326956 IGLV4-69A0A075B6H9 119 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 SOCS3O14543 225 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 UBE2D3P61077 147 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 UBE2D2P62837 147 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 FAM74A4Q5TZK3 123 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 SDHAF1A6NFY7 115 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 SRD5A1P18405 259 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 SUMO4Q6EEV6 95 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 RHPN1-AS1Q9BWJ2 59 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 JPT2Q9H910 190 aa11□□□□□ -0.65
SSBP3-201ENST00000326956 IGHV4OR15-8A0A075B7B6 117 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 A0A087WW49 117 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 NFE4Q86UQ8 179 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 TEN1Q86WV5 123 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 VCX2Q9H322 139 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 ZNF256Q9Y2P7 627 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-201ENST00000326956 IGIPA6NJ69 53 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 TSHBP01222 138 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms