RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MUC4Q99102 2169 aa15.04■□□□□ -0
CRLF3-201ENST00000324238 BLCAPP62952 87 aa15.04■□□□□ -0
CRLF3-201ENST00000324238 TRBV7-1A0A0A6YYK4 115 aa15.04■□□□□ -0
CRLF3-201ENST00000324238 IGLL5B9A064 214 aa15.03■□□□□ -0
CRLF3-201ENST00000324238 HIGD1BQ9P298 99 aa15.03■□□□□ -0
CRLF3-201ENST00000324238 SUMO2P61956 95 aaKnown RBP15.03■□□□□ -0
CRLF3-201ENST00000324238 C12orf74Q32Q52 190 aa15.03■□□□□ -0
CRLF3-201ENST00000324238 KLHL30-AS1Q8NEE0 82 aa15.03■□□□□ -0
CRLF3-201ENST00000324238 OR5A1Q8NGJ0 315 aa15.03■□□□□ -0
CRLF3-201ENST00000324238 CHTOPQ9Y3Y2 248 aaKnown RBP15.03■□□□□ -0
CRLF3-201ENST00000324238 ZNF479Q96JC4 524 aa15.03■□□□□ -0
CRLF3-201ENST00000324238 SPOCK3Q9BQ16 436 aa15.02■□□□□ -0
CRLF3-201ENST00000324238 U3KQE9 123 aa15.02■□□□□ -0
CRLF3-201ENST00000324238 IGKV3-20P01619 116 aa15.02□□□□□ -0.01
CRLF3-201ENST00000324238 PF4V1P10720 104 aa15.01□□□□□ -0.01
CRLF3-201ENST00000324238 TMEM95Q3KNT9 176 aa15.01□□□□□ -0.01
CRLF3-201ENST00000324238 OR10J6PQ8NGY7 276 aa15.01□□□□□ -0.01
CRLF3-201ENST00000324238 TM2D2Q9BX73 214 aa15.01□□□□□ -0.01
CRLF3-201ENST00000324238 ETDBQ3ZM63 59 aa15.01□□□□□ -0.01
CRLF3-201ENST00000324238 PIFOQ8TCI5 191 aa15.01□□□□□ -0.01
CRLF3-201ENST00000324238 SMPXQ9UHP9 88 aa15.01□□□□□ -0.01
CRLF3-201ENST00000324238 SONP18583 2426 aaKnown RBP15.01□□□□□ -0.01
CRLF3-201ENST00000324238 A0A087WWL8 130 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 CD300EQ496F6 205 aaPredicted RBP15□□□□□ -0.01
CRLF3-201ENST00000324238 C2orf66Q6UXQ4 117 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 MAPK1IP1LQ8NDC0 245 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 GTSF1LQ9H1H1 148 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 MXRA5Q9NR99 2828 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 H3BUX3 64 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 OR11H12B2RN74 326 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 F8VRH5 84 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 H7C1H1 209 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 OR11H1Q8NG94 326 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 OR11H2Q8NH07 326 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 DOPEY1Q5JWR5 2465 aa15□□□□□ -0.01
CRLF3-201ENST00000324238 ZNF462Q96JM2 2506 aa14.99□□□□□ -0.01
CRLF3-201ENST00000324238 DUSP14O95147 198 aaKnown RBP14.99□□□□□ -0.01
CRLF3-201ENST00000324238 ASIPP42127 132 aa14.99□□□□□ -0.01
CRLF3-201ENST00000324238 SCGB2A2Q13296 93 aa14.99□□□□□ -0.01
CRLF3-201ENST00000324238 PLEKHB2Q96CS7 222 aa14.99□□□□□ -0.01
CRLF3-201ENST00000324238 PRSS29PA6NIE9 313 aa14.98□□□□□ -0.01
CRLF3-201ENST00000324238 INSL3P51460 131 aa14.98□□□□□ -0.01
CRLF3-201ENST00000324238 E9PLD3 99 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 RPL39P62891 51 aaKnown RBP14.97□□□□□ -0.01
CRLF3-201ENST00000324238 BAALCQ8WXS3 180 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 PRADC1Q9BSG0 188 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 MOB4Q9Y3A3 225 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 ANKRD17O75179 2603 aaKnown RBP14.97□□□□□ -0.01
CRLF3-201ENST00000324238 TMEM238C9JI98 176 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 PLNP26678 52 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 C9orf139Q6ZV77 190 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 TRAV21A0A0B4J279 112 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 RNF223E7ERA6 249 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 SLC25A16P16260 332 aa14.97□□□□□ -0.01
CRLF3-201ENST00000324238 F5H697 171 aa14.96□□□□□ -0.01
CRLF3-201ENST00000324238 RNASE3P12724 160 aaKnown RBP14.96□□□□□ -0.01
CRLF3-201ENST00000324238 HLA-DRB4P13762 266 aa14.96□□□□□ -0.01
CRLF3-201ENST00000324238 DPH3P1Q9H4G8 78 aa14.96□□□□□ -0.01
CRLF3-201ENST00000324238 HLA-DRB4X5D2U9 266 aa14.96□□□□□ -0.01
CRLF3-201ENST00000324238 IGHV4-4A0A075B6R2 117 aa14.96□□□□□ -0.02
CRLF3-201ENST00000324238 MYMXA0A1B0GTQ4 84 aa14.96□□□□□ -0.02
CRLF3-201ENST00000324238 FAM74A4Q5TZK3 123 aa14.96□□□□□ -0.02
CRLF3-201ENST00000324238 FOXI2Q6ZQN5 318 aa14.96□□□□□ -0.02
CRLF3-201ENST00000324238 NEXN-AS1Q8NBZ9 246 aa14.96□□□□□ -0.02
CRLF3-201ENST00000324238 MRAP2Q96G30 205 aa14.96□□□□□ -0.02
CRLF3-201ENST00000324238 RHPN1-AS1Q9BWJ2 59 aa14.96□□□□□ -0.02
CRLF3-201ENST00000324238 IGHV4-30-2A0A087WSY4 118 aa14.95□□□□□ -0.02
CRLF3-201ENST00000324238 LGALS1P09382 135 aaKnown RBP14.95□□□□□ -0.02
CRLF3-201ENST00000324238 SCGB1D4Q6XE38 83 aa14.95□□□□□ -0.02
CRLF3-201ENST00000324238 IGHV1-69DA0A0B4J2H0 117 aa14.95□□□□□ -0.02
CRLF3-201ENST00000324238 IGHV1-69P01742 117 aa14.95□□□□□ -0.02
CRLF3-201ENST00000324238 ATP5J2P56134 94 aa14.95□□□□□ -0.02
CRLF3-201ENST00000324238 ZNF815PA8K554 130 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 SMAGPQ0VAQ4 97 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 C10orf99Q6UWK7 81 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 TOMM6Q96B49 74 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 TSSC4Q9Y5U2 329 aaPredicted RBP14.94□□□□□ -0.02
CRLF3-201ENST00000324238 TRBV7-3A0A075B6L6 115 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 TGFAP01135 160 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 LINC00477Q96M19 166 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 NAV2Q8IVL1 2488 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 TRAV12-3A0A0B4J271 114 aa14.94□□□□□ -0.02
CRLF3-201ENST00000324238 MRPL53Q96EL3 112 aaKnown RBP14.94□□□□□ -0.02
CRLF3-201ENST00000324238 TRAV12-2A0A075B6T6 113 aa14.93□□□□□ -0.02
CRLF3-201ENST00000324238 ORMDL2Q53FV1 153 aa14.93□□□□□ -0.02
CRLF3-201ENST00000324238 CCL19Q99731 98 aa14.93□□□□□ -0.02
CRLF3-201ENST00000324238 CCDC168Q8NDH2 2452 aa14.93□□□□□ -0.02
CRLF3-201ENST00000324238 SOCS3O14543 225 aa14.93□□□□□ -0.02
CRLF3-201ENST00000324238 PRSS47A8MTI9 375 aa14.92□□□□□ -0.02
CRLF3-201ENST00000324238 APOMO95445 188 aa14.92□□□□□ -0.02
CRLF3-201ENST00000324238 OPRPNQ99935 248 aaPredicted RBP14.92□□□□□ -0.02
CRLF3-201ENST00000324238 PGPEP1Q9NXJ5 209 aa14.92□□□□□ -0.02
CRLF3-201ENST00000324238 TEX15Q9BXT5 2789 aa14.92□□□□□ -0.02
CRLF3-201ENST00000324238 AVPP01185 164 aa14.92□□□□□ -0.02
CRLF3-201ENST00000324238 SRSF9Q13242 221 aaKnown RBP eCLIP14.92□□□□□ -0.02
CRLF3-201ENST00000324238 FBN2P35556 2912 aa14.92□□□□□ -0.02
CRLF3-201ENST00000324238 TP53TG1Q9Y2A0 90 aa14.91□□□□□ -0.02
CRLF3-201ENST00000324238 SPANXB1Q9NS25 103 aaPredicted RBP14.91□□□□□ -0.02
CRLF3-201ENST00000324238 ZNF256Q9Y2P7 627 aaPredicted RBP14.91□□□□□ -0.02
CRLF3-201ENST00000324238 C11orf86A6NJI1 115 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms