RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 Q6YL49 198 aa16.74■□□□□ 0.27
PNKP-201ENST00000322344 TMEM160Q9NX00 188 aa16.74■□□□□ 0.27
PNKP-201ENST00000322344 K7EQG2 157 aa16.72■□□□□ 0.27
PNKP-201ENST00000322344 RPL32P62910 135 aaKnown RBP16.72■□□□□ 0.27
PNKP-201ENST00000322344 GTSCR1Q86UQ5 136 aa16.72■□□□□ 0.27
PNKP-201ENST00000322344 SCGB3A1Q96QR1 104 aa16.72■□□□□ 0.27
PNKP-201ENST00000322344 KIF25-AS1Q9Y6Z4 181 aa16.72■□□□□ 0.27
PNKP-201ENST00000322344 CFAP46Q8IYW2 2715 aa16.72■□□□□ 0.27
PNKP-201ENST00000322344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.72■□□□□ 0.277e-7■■■■□ 24.2
PNKP-201ENST00000322344 RNF223E7ERA6 249 aa16.72■□□□□ 0.27
PNKP-201ENST00000322344 H7C1H1 209 aa16.72■□□□□ 0.27
PNKP-201ENST00000322344 IGHV4OR15-8A0A075B7B6 117 aa16.71■□□□□ 0.27
PNKP-201ENST00000322344 A0A087WW49 117 aa16.71■□□□□ 0.27
PNKP-201ENST00000322344 A0A0J9YX75 114 aa16.71■□□□□ 0.27
PNKP-201ENST00000322344 ZNF688P0C7X2 276 aa16.71■□□□□ 0.27
PNKP-201ENST00000322344 AMMECR1LQ6DCA0 310 aa16.71■□□□□ 0.27
PNKP-201ENST00000322344 ERASQ7Z444 233 aa16.71■□□□□ 0.27
PNKP-201ENST00000322344 F8VRH5 84 aa16.7■□□□□ 0.26
PNKP-201ENST00000322344 K7EP13 123 aa16.7■□□□□ 0.26
PNKP-201ENST00000322344 UBE2E2Q96LR5 201 aa16.7■□□□□ 0.26
PNKP-201ENST00000322344 ZNF702PQ9H963 129 aa16.7■□□□□ 0.26
PNKP-201ENST00000322344 TRAV12-3A0A0B4J271 114 aa16.7■□□□□ 0.26
PNKP-201ENST00000322344 IGHV4-31P0DP07 118 aa16.7■□□□□ 0.26
PNKP-201ENST00000322344 LINC00315P59091 139 aa16.7■□□□□ 0.26
PNKP-201ENST00000322344 MAPK1IP1LQ8NDC0 245 aa16.7■□□□□ 0.26
PNKP-201ENST00000322344 CD7P09564 240 aa16.69■□□□□ 0.26
PNKP-201ENST00000322344 C9orf118A6NHY6 69 aa16.69■□□□□ 0.26
PNKP-201ENST00000322344 LINC01549A6NIU2 74 aa16.69■□□□□ 0.26
PNKP-201ENST00000322344 DUSP14O95147 198 aaKnown RBP16.69■□□□□ 0.26
PNKP-201ENST00000322344 PRB1P04280 392 aa16.69■□□□□ 0.26
PNKP-201ENST00000322344 SYNJ2BPP57105 145 aa16.69■□□□□ 0.26
PNKP-201ENST00000322344 RNF152Q8N8N0 203 aa16.69■□□□□ 0.26
PNKP-201ENST00000322344 CSTL1Q9H114 145 aa16.69■□□□□ 0.26
PNKP-201ENST00000322344 TRAV8-6A0A0B4J262 113 aa16.68■□□□□ 0.26
PNKP-201ENST00000322344 C2orf66Q6UXQ4 117 aa16.68■□□□□ 0.26
PNKP-201ENST00000322344 BEX4Q9NWD9 120 aaPredicted RBP16.68■□□□□ 0.26
PNKP-201ENST00000322344 NEXN-AS1Q8NBZ9 246 aa16.67■□□□□ 0.26
PNKP-201ENST00000322344 CHAC1Q9BUX1 264 aa16.67■□□□□ 0.26
PNKP-201ENST00000322344 CHTOPQ9Y3Y2 248 aaKnown RBP16.67■□□□□ 0.26
PNKP-201ENST00000322344 C9orf85Q96MD7 179 aa16.67■□□□□ 0.26
PNKP-201ENST00000322344 COL12A1Q99715 3063 aa16.66■□□□□ 0.26
PNKP-201ENST00000322344 ZFHX3Q15911 3703 aa16.66■□□□□ 0.26
PNKP-201ENST00000322344 IGSF10Q6WRI0 2623 aa16.66■□□□□ 0.26
PNKP-201ENST00000322344 TRBV25-1A0A075B6N4 114 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 HOXD3P31249 432 aaPredicted RBP16.65■□□□□ 0.26
PNKP-201ENST00000322344 WFDC12Q8WWY7 111 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 SPG11Q96JI7 2443 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 VPS13CQ709C8 3753 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 IGHV3-16A0A0C4DH30 117 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 CDKN1BP46527 198 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 SUMO4Q6EEV6 95 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 LRRC75A-AS1Q8N1F1 130 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 SYT8Q8NBV8 401 aa16.65■□□□□ 0.26
PNKP-201ENST00000322344 USP9XQ93008 2570 aaPredicted RBP16.64■□□□□ 0.26
PNKP-201ENST00000322344 TTTY13Q9BZ97 58 aa16.64■□□□□ 0.25
PNKP-201ENST00000322344 HOXA3O43365 443 aaPredicted RBP16.63■□□□□ 0.25
PNKP-201ENST00000322344 FOXI2Q6ZQN5 318 aa16.63■□□□□ 0.25
PNKP-201ENST00000322344 POLR2KP53803 58 aaKnown RBP16.63■□□□□ 0.25
PNKP-201ENST00000322344 BAALCQ8WXS3 180 aa16.63■□□□□ 0.25
PNKP-201ENST00000322344 IGHV1OR15-1A0A075B7D0 117 aa16.62■□□□□ 0.25
PNKP-201ENST00000322344 VCYO14598 125 aa16.62■□□□□ 0.25
PNKP-201ENST00000322344 DEFB113Q30KQ7 82 aa16.62■□□□□ 0.25
PNKP-201ENST00000322344 GTF2H5Q6ZYL4 71 aa16.62■□□□□ 0.25
PNKP-201ENST00000322344 BBC3Q96PG8 261 aaPredicted RBP16.62■□□□□ 0.25
PNKP-201ENST00000322344 CYSLTR1Q9Y271 337 aa16.62■□□□□ 0.25
PNKP-201ENST00000322344 GCSHP23434 173 aa16.62■□□□□ 0.25
PNKP-201ENST00000322344 TAL2Q16559 108 aa16.62■□□□□ 0.25
PNKP-201ENST00000322344 CELSR1Q9NYQ6 3014 aa16.61■□□□□ 0.25
PNKP-201ENST00000322344 TRBV6-5A0A0K0K1A5 114 aa16.61■□□□□ 0.25
PNKP-201ENST00000322344 IGKV3-20P01619 116 aa16.61■□□□□ 0.25
PNKP-201ENST00000322344 SMIM13P0DJ93 91 aa16.61■□□□□ 0.25
PNKP-201ENST00000322344 ZNF843Q8N446 348 aa16.61■□□□□ 0.25
PNKP-201ENST00000322344 JPT2Q9H910 190 aa16.61■□□□□ 0.25
PNKP-201ENST00000322344 GAGE10A6NGK3 116 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 F5H697 171 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 Q8N2B8 174 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 TM2D2Q9BX73 214 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 TRAV12-2A0A075B6T6 113 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 A0A087WWL8 130 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 Q5PR19 223 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 KIR2DL4Q99706 377 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 CBY1Q9Y3M2 126 aa16.6■□□□□ 0.25
PNKP-201ENST00000322344 H3BUT2 72 aa16.59■□□□□ 0.25
PNKP-201ENST00000322344 SPINK13Q1W4C9 94 aa16.59■□□□□ 0.25
PNKP-201ENST00000322344 Q8N1Y9 231 aa16.59■□□□□ 0.25
PNKP-201ENST00000322344 MAPKAPK5-AS1Q8N8E1 139 aa16.59■□□□□ 0.25
PNKP-201ENST00000322344 MUC4Q99102 2169 aa16.59■□□□□ 0.25
PNKP-201ENST00000322344 PRSS29PA6NIE9 313 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 OR11H12B2RN74 326 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 TCTEX1D4Q5JR98 221 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 ZFP2Q6ZN57 461 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 CEND1Q8N111 149 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 OR11H1Q8NG94 326 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 OR11H2Q8NH07 326 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 DUX5Q96PT3 197 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 MDFICQ9P1T7 246 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 FLNCQ14315 2725 aa16.58■□□□□ 0.25
PNKP-201ENST00000322344 RNASE8Q8TDE3 154 aaKnown RBP16.58■□□□□ 0.24
PNKP-201ENST00000322344 TRGV11A0A075B6L2 103 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 LINC01619G3V211 115 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms