RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TOMM6Q96B49 74 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 PRB4P10163 310 aaPredicted RBP5.59□□□□□ -1.51
SMC1A-201ENST00000322213 Q6ZR03 302 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 C2orf91Q6ZV80 131 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 IGHV1-46P01743 117 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 UCNP55089 124 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 WT1-ASQ06250 92 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 SMIM9A6NGZ8 99 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 LGALS9O00182 355 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 ZNF876PQ49A33 203 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 IMUPQ9GZP8 106 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 TMEM178BH3BS89 294 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 M0R1W7 72 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 NRGNQ92686 78 aa5.59□□□□□ -1.51
SMC1A-201ENST00000322213 BAALC-AS2P0C853 105 aa5.59□□□□□ -1.52
SMC1A-201ENST00000322213 GP9P14770 177 aa5.59□□□□□ -1.52
SMC1A-201ENST00000322213 FAM167A-AS1Q96KT0 104 aa5.59□□□□□ -1.52
SMC1A-201ENST00000322213 C3orf36Q3SXR2 165 aa5.59□□□□□ -1.52
SMC1A-201ENST00000322213 TRBV10-2A0A0K0K1G8 114 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 ZNF134P52741 427 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 RSPO1Q2MKA7 263 aaPredicted RBP5.58□□□□□ -1.52
SMC1A-201ENST00000322213 BAALCQ8WXS3 180 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 USMG5Q96IX5 58 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 IGHG2P01859 326 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 TP53TG3Q9ULZ0 132 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 OOSP1A8MZH6 123 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 MINOS1Q5TGZ0 78 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 MINOS1-NBL1R4GNA1 71 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 ZNF625Q96I27 306 aaPredicted RBP5.58□□□□□ -1.52
SMC1A-201ENST00000322213 IGHV1-69DA0A0B4J2H0 117 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 C17orf58Q2M2W7 97 aa5.58□□□□□ -1.52
SMC1A-201ENST00000322213 H3BQ85 93 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 XGP55808 180 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 WDR86Q86TI4 376 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 EGR2P11161 476 aaPredicted RBP5.57□□□□□ -1.52
SMC1A-201ENST00000322213 Q6ZSR3 168 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 ZNF524Q96C55 264 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 ITPR1Q14643 2758 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 TRGV2A0A075B6R0 118 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 IGHV3-73A0A0B4J1V6 119 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 MLANAQ16655 118 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 Q6Q795 121 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 TRBV6-1A0A0K0K1D8 114 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 C9orf106Q8NAJ2 232 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 TP73-AS1Q9UF72 201 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 CRYGBP07316 175 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 ATP5EP56381 51 aaPredicted RBP5.57□□□□□ -1.52
SMC1A-201ENST00000322213 C8orf31Q8N9H6 132 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 ITLN2Q8WWU7 325 aaPredicted RBP5.57□□□□□ -1.52
SMC1A-201ENST00000322213 PRSS22Q9GZN4 317 aa5.57□□□□□ -1.52
SMC1A-201ENST00000322213 LINC01620Q4KN68 170 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 CFHR4Q92496 578 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 LENEPQ9Y5L5 61 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 VMO1Q7Z5L0 202 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 CCL21O00585 134 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 NDPQ00604 133 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 LINC00643Q86TS7 51 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 C3orf56Q8N813 242 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 WISP1O95388 367 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 INSP01308 110 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 Q8TCH9 128 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 C11orf86A6NJI1 115 aa5.56□□□□□ -1.52
SMC1A-201ENST00000322213 MRPL53Q96EL3 112 aaKnown RBP5.56□□□□□ -1.52
SMC1A-201ENST00000322213 DAZ1Q9NQZ3 744 aaKnown RBP5.56□□□□□ -1.52
SMC1A-201ENST00000322213 TRAV41A0A0B4J266 112 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 C19orf71A6NCJ1 209 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 F6UB75 175 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 CFHR1Q03591 330 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 FDCSPQ8NFU4 85 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 PINLYPA6NC86 204 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 C1orf159Q96HA4 380 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 LY6EQ16553 131 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-201ENST00000322213 CCL19Q99731 98 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 P0DMU3 169 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 FAM231AP0DMU4 169 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 FAM231CP0DMU5 169 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 RPL36AP83881 106 aaKnown RBP5.55□□□□□ -1.52
SMC1A-201ENST00000322213 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
SMC1A-201ENST00000322213 ZNF71Q9NQZ8 489 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-201ENST00000322213 LINC00311Q8N616 119 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 C17orf82Q86X59 251 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-201ENST00000322213 FAM240AA0A1B0GVK7 77 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 LINC00310P59036 64 aa5.55□□□□□ -1.52
SMC1A-201ENST00000322213 P0C879 139 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 LINC00694P0DN24 101 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 VSIG2Q96IQ7 327 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 BAHCC1Q9P281 2608 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 Q8N976 141 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 U3KQK5 164 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 STHQ8IWL8 128 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 NOTCH1P46531 2555 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 FRMD6-AS1P0C7T7 363 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 TEX36Q5VZQ5 186 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 APCP25054 2843 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 PRB3Q04118 309 aaPredicted RBP5.54□□□□□ -1.52
SMC1A-201ENST00000322213 CFAP126Q5VTH2 177 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms