RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 FAM210AQ96ND0 272 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 GNG13Q9P2W3 67 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 NAGKQ9UJ70 344 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 TP53TG3Q9ULZ0 132 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 EPDR1Q9UM22 224 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 TRAV21A0A0B4J279 112 aa9.67□□□□□ -0.86
RPP40-201ENST00000319533 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
RPP40-201ENST00000319533 C9JQL5 133 aa9.67□□□□□ -0.86
RPP40-201ENST00000319533 F6UZH7 168 aa9.67□□□□□ -0.86
RPP40-201ENST00000319533 INAFM2P0DMQ5 153 aa9.67□□□□□ -0.86
RPP40-201ENST00000319533 CRYBA4P53673 196 aa9.67□□□□□ -0.86
RPP40-201ENST00000319533 FHL2Q14192 279 aa9.67□□□□□ -0.86
RPP40-201ENST00000319533 NKX6-2Q9C056 277 aaPredicted RBP9.67□□□□□ -0.86
RPP40-201ENST00000319533 TNFRSF18Q9Y5U5 241 aa9.67□□□□□ -0.86
RPP40-201ENST00000319533 A0A087WTM6 91 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 K7EP13 123 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 BCL2P10415 239 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
RPP40-201ENST00000319533 UBE2G2P60604 165 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
RPP40-201ENST00000319533 TMEM183BQ1AE95 376 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 ZNF506Q5JVG8 444 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 TMEM183AQ8IXX5 376 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 TMEM75Q8N9X5 138 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 SGK494Q96LW2 274 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 HHLA3Q9XRX5 114 aa9.66□□□□□ -0.86
RPP40-201ENST00000319533 DNAH8Q96JB1 4490 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 RBFOX3A6NFN3 312 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 PAGE4O60829 102 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 PPT1P50897 306 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 FLI1Q01543 452 aaPredicted RBP9.65□□□□□ -0.86
RPP40-201ENST00000319533 NDUFA5Q16718 116 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 TDRG1Q3Y452 100 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 PRNTQ86SH4 94 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 TVP23CQ96ET8 276 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 KCNS1Q96KK3 526 aa9.65□□□□□ -0.86
RPP40-201ENST00000319533 MRPL16Q9NX20 251 aaKnown RBP9.65□□□□□ -0.86
RPP40-201ENST00000319533 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
RPP40-201ENST00000319533 FAM74A7A6NL05 159 aa9.64□□□□□ -0.87
RPP40-201ENST00000319533 SMUG1Q53HV7 270 aa9.64□□□□□ -0.87
RPP40-201ENST00000319533 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
RPP40-201ENST00000319533 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
RPP40-201ENST00000319533 SPXQ9BT56 116 aa9.64□□□□□ -0.87
RPP40-201ENST00000319533 SDF2L1Q9HCN8 221 aa9.64□□□□□ -0.87
RPP40-201ENST00000319533 MANBALQ9NQG1 85 aa9.64□□□□□ -0.87
RPP40-201ENST00000319533 PEX7O00628 323 aa9.63□□□□□ -0.87
RPP40-201ENST00000319533 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
RPP40-201ENST00000319533 Q5VSD8 79 aa9.63□□□□□ -0.87
RPP40-201ENST00000319533 HIST1H2BAQ96A08 127 aa9.63□□□□□ -0.87
RPP40-201ENST00000319533 C8orf49Q96NF6 230 aa9.63□□□□□ -0.87
RPP40-201ENST00000319533 MDFICQ9P1T7 246 aa9.63□□□□□ -0.87
RPP40-201ENST00000319533 LY96Q9Y6Y9 160 aa9.63□□□□□ -0.87
RPP40-201ENST00000319533 ATP6V1G1O75348 118 aa9.62□□□□□ -0.87
RPP40-201ENST00000319533 GCGP01275 180 aa9.62□□□□□ -0.87
RPP40-201ENST00000319533 IFNA1P01562 189 aa9.62□□□□□ -0.87
RPP40-201ENST00000319533 IGLV2-11P01706 119 aa9.62□□□□□ -0.87
RPP40-201ENST00000319533 SRP19P09132 144 aaKnown RBP9.62□□□□□ -0.87
RPP40-201ENST00000319533 FRZBQ92765 325 aa9.62□□□□□ -0.87
RPP40-201ENST00000319533 TCEAL7Q9BRU2 100 aa9.62□□□□□ -0.87
RPP40-201ENST00000319533 EIF5A2Q9GZV4 153 aaKnown RBP9.62□□□□□ -0.87
RPP40-201ENST00000319533 MSRB1Q9NZV6 116 aa9.62□□□□□ -0.87
RPP40-201ENST00000319533 TRAV34A0A0B4J273 112 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 IGHV3-16A0A0C4DH30 117 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 K7EQD1 137 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 GNRH2O43555 120 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 TYMSP04818 313 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 PFN1P07737 140 aaKnown RBP9.61□□□□□ -0.87
RPP40-201ENST00000319533 MEF2BQ02080 365 aaPredicted RBP9.61□□□□□ -0.87
RPP40-201ENST00000319533 CST9LP1Q5W188 147 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 RASL10AQ92737 203 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 VAX2Q9UIW0 290 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 ARL2-SNX15V9GYD0 113 aa9.61□□□□□ -0.87
RPP40-201ENST00000319533 SRRM2Q9UQ35 2752 aaKnown RBP9.61□□□□□ -0.87
RPP40-201ENST00000319533 M0R2P5 195 aa9.6□□□□□ -0.87
RPP40-201ENST00000319533 ADCYAP1P18509 176 aa9.6□□□□□ -0.87
RPP40-201ENST00000319533 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
RPP40-201ENST00000319533 UQCC3Q6UW78 93 aa9.6□□□□□ -0.87
RPP40-201ENST00000319533 WFDC10BQ8IUB3 73 aa9.6□□□□□ -0.87
RPP40-201ENST00000319533 ZNF479Q96JC4 524 aa9.6□□□□□ -0.87
RPP40-201ENST00000319533 LINC00479Q96M42 142 aa9.6□□□□□ -0.87
RPP40-201ENST00000319533 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 SCO2A0A1W2PP80 73 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 ORM1P02763 201 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 EVI2AP22794 236 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 GCSHP23434 173 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 SRIP30626 198 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 UBE2G1P62253 170 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 PEA15Q15121 130 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 Q86TA4 180 aa9.59□□□□□ -0.87
RPP40-201ENST00000319533 FLG2Q5D862 2391 aaPredicted RBP9.59□□□□□ -0.87
RPP40-201ENST00000319533 SFTA3P0C7M3 94 aa9.58□□□□□ -0.88
RPP40-201ENST00000319533 GYPEP15421 78 aa9.58□□□□□ -0.88
RPP40-201ENST00000319533 FMC1Q96HJ9 113 aa9.58□□□□□ -0.88
RPP40-201ENST00000319533 ZFP30Q9Y2G7 519 aa9.58□□□□□ -0.88
RPP40-201ENST00000319533 TRAV4A0A0B4J268 109 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 TMEM218A2RU14 115 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms