RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 H2AFB1P0C5Y9 115 aa11.06□□□□□ -0.64
HDDC2-201ENST00000318787 ASIPP42127 132 aa11.06□□□□□ -0.64
HDDC2-201ENST00000318787 ZC2HC1AQ96GY0 325 aa11.06□□□□□ -0.64
HDDC2-201ENST00000318787 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
HDDC2-201ENST00000318787 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
HDDC2-201ENST00000318787 PGPEP1LA6NFU8 196 aa11.05□□□□□ -0.64
HDDC2-201ENST00000318787 TNP2Q05952 138 aa11.05□□□□□ -0.64
HDDC2-201ENST00000318787 ZNF506Q5JVG8 444 aa11.05□□□□□ -0.64
HDDC2-201ENST00000318787 LYPD5Q6UWN5 251 aa11.05□□□□□ -0.64
HDDC2-201ENST00000318787 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
HDDC2-201ENST00000318787 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
HDDC2-201ENST00000318787 TMSB15BA0A087X1C1 80 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 SCO2A0A1W2PP80 73 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 H3BVH4 76 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 SH2D1AO60880 128 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 RNASE3P12724 160 aaKnown RBP11.04□□□□□ -0.64
HDDC2-201ENST00000318787 LGALSLQ3ZCW2 172 aaPredicted RBP11.04□□□□□ -0.64
HDDC2-201ENST00000318787 DPPA3Q6W0C5 159 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 TXNDC17Q9BRA2 123 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 ZFP30Q9Y2G7 519 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 KIAA1109Q2LD37 5005 aa11.04□□□□□ -0.64
HDDC2-201ENST00000318787 GRIFINA4D1Z8 144 aa11.03□□□□□ -0.64
HDDC2-201ENST00000318787 FAM162BQ5T6X4 162 aa11.03□□□□□ -0.64
HDDC2-201ENST00000318787 CFAP126Q5VTH2 177 aa11.03□□□□□ -0.64
HDDC2-201ENST00000318787 RS1O15537 224 aa11.03□□□□□ -0.64
HDDC2-201ENST00000318787 GATA1P15976 413 aaPredicted RBP11.03□□□□□ -0.64
HDDC2-201ENST00000318787 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
HDDC2-201ENST00000318787 GNG13Q9P2W3 67 aa11.03□□□□□ -0.64
HDDC2-201ENST00000318787 CRIP1P50238 77 aa11.02□□□□□ -0.65
HDDC2-201ENST00000318787 EIF5AL1Q6IS14 154 aaKnown RBP11.02□□□□□ -0.65
HDDC2-201ENST00000318787 TCTE3Q8IZS6 198 aa11.02□□□□□ -0.65
HDDC2-201ENST00000318787 SLC25A29Q8N8R3 303 aa11.02□□□□□ -0.65
HDDC2-201ENST00000318787 PRADC1Q9BSG0 188 aa11.02□□□□□ -0.65
HDDC2-201ENST00000318787 DYNC1H1Q14204 4646 aaKnown RBP11.01□□□□□ -0.65
HDDC2-201ENST00000318787 A0A1W2PPQ1 181 aa11.01□□□□□ -0.65
HDDC2-201ENST00000318787 LTAP01374 205 aa11.01□□□□□ -0.65
HDDC2-201ENST00000318787 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
HDDC2-201ENST00000318787 WFDC10BQ8IUB3 73 aa11.01□□□□□ -0.65
HDDC2-201ENST00000318787 PKD1P98161 4303 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 KRBOX1C9JBD0 128 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 TEX46H3BTG2 121 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 ARMS2P0C7Q2 107 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 LINC00315P59091 139 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 RHOHQ15669 191 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 PRR27Q6MZM9 219 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 Q6ZNX1 250 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 AKAP14Q86UN6 197 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 SYT8Q8NBV8 401 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 LY96Q9Y6Y9 160 aa11□□□□□ -0.65
HDDC2-201ENST00000318787 M0R381 172 aa10.99□□□□□ -0.65
HDDC2-201ENST00000318787 C1QBP02746 253 aa10.99□□□□□ -0.65
HDDC2-201ENST00000318787 CCL20P78556 96 aa10.99□□□□□ -0.65
HDDC2-201ENST00000318787 FAM74A4Q5TZK3 123 aa10.99□□□□□ -0.65
HDDC2-201ENST00000318787 JPT2Q9H910 190 aa10.99□□□□□ -0.65
HDDC2-201ENST00000318787 IL36BQ9NZH7 164 aa10.99□□□□□ -0.65
HDDC2-201ENST00000318787 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
HDDC2-201ENST00000318787 DNAH11Q96DT5 4516 aa10.99□□□□□ -0.65
HDDC2-201ENST00000318787 TRBV6-1A0A0K0K1D8 114 aa10.98□□□□□ -0.65
HDDC2-201ENST00000318787 A8MWV9 139 aa10.98□□□□□ -0.65
HDDC2-201ENST00000318787 S100A9P06702 114 aaKnown RBP10.98□□□□□ -0.65
HDDC2-201ENST00000318787 MGST1P10620 155 aaKnown RBP10.98□□□□□ -0.65
HDDC2-201ENST00000318787 RAB5CP51148 216 aa10.98□□□□□ -0.65
HDDC2-201ENST00000318787 ZNF674Q2M3X9 581 aa10.98□□□□□ -0.65
HDDC2-201ENST00000318787 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
HDDC2-201ENST00000318787 PARLQ9H300 379 aa10.98□□□□□ -0.65
HDDC2-201ENST00000318787 MANBALQ9NQG1 85 aa10.98□□□□□ -0.65
HDDC2-201ENST00000318787 TRBV6-4A0A1B0GX49 114 aa10.97□□□□□ -0.65
HDDC2-201ENST00000318787 CIDEAO60543 219 aa10.97□□□□□ -0.65
HDDC2-201ENST00000318787 RPL19P84098 196 aaKnown RBP10.97□□□□□ -0.65
HDDC2-201ENST00000318787 SH2D6Q7Z4S9 175 aa10.97□□□□□ -0.65
HDDC2-201ENST00000318787 TNFRSF18Q9Y5U5 241 aa10.97□□□□□ -0.65
HDDC2-201ENST00000318787 TRAV9-2A0A087WT02 112 aa10.96□□□□□ -0.65
HDDC2-201ENST00000318787 EVI2AP22794 236 aa10.96□□□□□ -0.65
HDDC2-201ENST00000318787 SULT1A2P50226 295 aa10.96□□□□□ -0.65
HDDC2-201ENST00000318787 OR10J3Q5JRS4 329 aa10.96□□□□□ -0.65
HDDC2-201ENST00000318787 COX8CQ7Z4L0 72 aa10.96□□□□□ -0.65
HDDC2-201ENST00000318787 SLC51BQ86UW2 128 aa10.96□□□□□ -0.65
HDDC2-201ENST00000318787 PTH2Q96A98 100 aa10.96□□□□□ -0.65
HDDC2-201ENST00000318787 SAMD10Q9BYL1 202 aa10.96□□□□□ -0.65
HDDC2-201ENST00000318787 A0A087WWL8 130 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 GAGE12JA6NER3 117 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 C16orf90A8MZG2 172 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 RPL35P42766 123 aaKnown RBP10.95□□□□□ -0.66
HDDC2-201ENST00000318787 GAGE1Q13065 139 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 GAGE4Q13068 117 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 GAGE5Q13069 117 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 GAGE13Q4V321 117 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 Q6ZSN1 163 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 DERL1Q9BUN8 251 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
HDDC2-201ENST00000318787 IFNA1P01562 189 aa10.94□□□□□ -0.66
HDDC2-201ENST00000318787 SSTP61278 116 aa10.94□□□□□ -0.66
HDDC2-201ENST00000318787 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
HDDC2-201ENST00000318787 ATP6V0E2Q8NHE4 81 aa10.94□□□□□ -0.66
HDDC2-201ENST00000318787 TRAV8-6A0A0B4J262 113 aa10.93□□□□□ -0.66
HDDC2-201ENST00000318787 CRYGDP07320 174 aa10.93□□□□□ -0.66
HDDC2-201ENST00000318787 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
HDDC2-201ENST00000318787 ZFP82Q8N141 532 aa10.93□□□□□ -0.66
HDDC2-201ENST00000318787 TRAV1-1A0A0B4J248 108 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms