RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 AMTNQ6UX39 209 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 NHP2Q9NX24 153 aaKnown RBP5.79□□□□□ -1.48
TRIM55-202ENST00000315962 CR1P17927 2039 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 C9orf118A6NHY6 69 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 HBDP02042 147 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 C19orf54Q5BKX5 351 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 C8orf86Q6ZUL3 223 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 ZNF479Q96JC4 524 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 C16orf92Q96LL3 132 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 FOXC2Q99958 501 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 TMEM160Q9NX00 188 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 UFC1Q9Y3C8 167 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 HIVEP1P15822 2718 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 A0A1W2PRX2 142 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 SCGB2A1O75556 95 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 VWFP04275 2813 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 GATA3P23771 443 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 SYNJ2BPP57105 145 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 SCGB2A2Q13296 93 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 GTSF1LQ9H1H1 148 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 TEX48A0A1B0GUV7 120 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 RPS20P60866 119 aaKnown RBP5.78□□□□□ -1.48
TRIM55-202ENST00000315962 UFSP1Q6NVU6 142 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 ADAMTSL5Q6ZMM2 481 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 BOD1L2Q8IYS8 172 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 C20orf173Q96LM9 149 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 RHPN1-AS1Q9BWJ2 59 aa5.78□□□□□ -1.48
TRIM55-202ENST00000315962 A6NDN8 102 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 K7EP34 96 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 VPREB3Q9UKI3 123 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 TENM1Q9UKZ4 2725 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 TRAV8-2A0A0B4J237 113 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 FAM223BA6NKX1 122 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 ZC2HC1BQ5TFG8 222 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 Q6YL49 198 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 GTF2H5Q6ZYL4 71 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 FAM223AQ8IWN6 122 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 TMEM158Q8WZ71 300 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 PRR25Q96S07 402 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 NPFFR1Q9GZQ6 430 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 AGPAT4-IT1Q9H0P7 198 aa5.77□□□□□ -1.49
TRIM55-202ENST00000315962 A0A1W2PPM0 123 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 IGLV1-40P01703 118 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 SEC11AP67812 179 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 SMAGPQ0VAQ4 97 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 YAE1D1Q9NRH1 226 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 PSMB8P28062 276 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 HSD52Q0P140 79 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 SAMD5Q5TGI4 173 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 SH2D6Q7Z4S9 175 aa5.76□□□□□ -1.49
TRIM55-202ENST00000315962 H3BRM9 83 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 LGALS9BQ3B8N2 356 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 LGALS9CQ6DKI2 356 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 GPHB5Q86YW7 130 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 MAPKAPK5-AS1Q8N8E1 139 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 CHAC1Q9BUX1 264 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 ATRQ13535 2644 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 BAHCC1Q9P281 2608 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 NBEAL2Q6ZNJ1 2754 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.75□□□□□ -1.49
TRIM55-202ENST00000315962 TNFRSF6BO95407 300 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 PDE6HQ13956 83 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 ZNF575Q86XF7 245 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 RNF185Q96GF1 192 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 ZNF702PQ9H963 129 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 IGHV4OR15-8A0A075B7B6 117 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 A0A087WW49 117 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 G3V4G9 280 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 H3BMG7 143 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 FABP2P12104 132 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 EMP1P54849 157 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 SLURP1P55000 103 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 WFDC2Q14508 124 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 LYPD1Q8N2G4 141 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 ESM1Q9NQ30 184 aa5.75□□□□□ -1.49
TRIM55-202ENST00000315962 MRPL35Q9NZE8 188 aaKnown RBP5.75□□□□□ -1.49
TRIM55-202ENST00000315962 TRBV25-1A0A075B6N4 114 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 J3QLI3 93 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 ZNF688P0C7X2 276 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 INSL3P51460 131 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 CFHR3Q02985 330 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 USMG5Q96IX5 58 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 MAP1LC3AQ9H492 121 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 DAZ1Q9NQZ3 744 aaKnown RBP5.74□□□□□ -1.49
TRIM55-202ENST00000315962 C2CD3Q4AC94 2353 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 HTN1P15515 57 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 PRR9Q5T870 116 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 SHISA2Q6UWI4 295 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 ZNF493Q6ZR52 646 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 NEGR1Q7Z3B1 354 aa5.74□□□□□ -1.49
TRIM55-202ENST00000315962 NDUFA4O00483 81 aa5.73□□□□□ -1.49
TRIM55-202ENST00000315962 SMIM13P0DJ93 91 aa5.73□□□□□ -1.49
TRIM55-202ENST00000315962 HOXD3P31249 432 aaPredicted RBP5.73□□□□□ -1.49
TRIM55-202ENST00000315962 ETDBQ3ZM63 59 aa5.73□□□□□ -1.49
TRIM55-202ENST00000315962 TMEM78Q5T7P6 136 aa5.73□□□□□ -1.49
TRIM55-202ENST00000315962 HHLA3Q9XRX5 114 aa5.73□□□□□ -1.49
TRIM55-202ENST00000315962 NACAE9PAV3 2078 aa5.73□□□□□ -1.49
TRIM55-202ENST00000315962 SCGB1A1P11684 91 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms