RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 LRP4O75096 1905 aa10.48□□□□□ -0.73
RFFL-201ENST00000315249 TET2Q6N021 2002 aaPredicted RBP10.48□□□□□ -0.73
RFFL-201ENST00000315249 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.48□□□□□ -0.73
RFFL-201ENST00000315249 CTSGP08311 255 aa10.48□□□□□ -0.73
RFFL-201ENST00000315249 ATXN8Q156A1 80 aa10.48□□□□□ -0.73
RFFL-201ENST00000315249 EDA2RQ9HAV5 297 aa10.48□□□□□ -0.73
RFFL-201ENST00000315249 RPL18AQ02543 176 aaKnown RBP10.48□□□□□ -0.73
RFFL-201ENST00000315249 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.47□□□□□ -0.73
RFFL-201ENST00000315249 IGKV2-29A2NJV5 120 aaPredicted RBP10.47□□□□□ -0.73
RFFL-201ENST00000315249 NDUFA11Q86Y39 141 aa10.47□□□□□ -0.73
RFFL-201ENST00000315249 A6NDX4 124 aa10.47□□□□□ -0.73
RFFL-201ENST00000315249 TNFRSF13BO14836 293 aaPredicted RBP10.47□□□□□ -0.73
RFFL-201ENST00000315249 CFHR4Q92496 578 aa10.47□□□□□ -0.73
RFFL-201ENST00000315249 C16orf54Q6UWD8 224 aa10.47□□□□□ -0.73
RFFL-201ENST00000315249 ZNF726P1Q15940 193 aa10.46□□□□□ -0.73
RFFL-201ENST00000315249 ORAOV1Q8WV07 137 aa10.46□□□□□ -0.73
RFFL-201ENST00000315249 BUB3O43684 328 aa10.46□□□□□ -0.73
RFFL-201ENST00000315249 IGLV1-47P01700 117 aa10.46□□□□□ -0.73
RFFL-201ENST00000315249 SNHG12Q9BXW3 62 aa10.46□□□□□ -0.73
RFFL-201ENST00000315249 WIPF3A6NGB9 483 aa10.46□□□□□ -0.74
RFFL-201ENST00000315249 TMEM141Q96I45 108 aa10.46□□□□□ -0.74
RFFL-201ENST00000315249 SPTBN4Q9H254 2564 aa10.46□□□□□ -0.74
RFFL-201ENST00000315249 SYS1-DBNDD2H3BUS1 97 aa10.46□□□□□ -0.74
RFFL-201ENST00000315249 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.74
RFFL-201ENST00000315249 EGR2P11161 476 aaPredicted RBP10.45□□□□□ -0.74
RFFL-201ENST00000315249 INSL3P51460 131 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 HIST1H2BLQ99880 126 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 Q6YL49 198 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 Q8N8P6 123 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 PROP1O75360 226 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 DOPEY1Q5JWR5 2465 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 DEFB1P60022 68 aa10.45□□□□□ -0.74
RFFL-201ENST00000315249 COL5A1P20908 1838 aaPredicted RBP10.44□□□□□ -0.74
RFFL-201ENST00000315249 STPG4Q8N801 248 aa10.44□□□□□ -0.74
RFFL-201ENST00000315249 IGLL1P15814 213 aa10.44□□□□□ -0.74
RFFL-201ENST00000315249 GPHB5Q86YW7 130 aa10.44□□□□□ -0.74
RFFL-201ENST00000315249 A0A087X0K7 114 aa10.44□□□□□ -0.74
RFFL-201ENST00000315249 AMTNQ6UX39 209 aa10.44□□□□□ -0.74
RFFL-201ENST00000315249 TMEM61Q8N0U2 210 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 HSD52Q0P140 79 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 ZNF479Q96JC4 524 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 NAA38Q9BRA0 125 aaKnown RBP10.43□□□□□ -0.74
RFFL-201ENST00000315249 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 IGKV1-17P01599 117 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 CT83Q5H943 113 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 C5orf38Q86SI9 138 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 UNQ9165/PRO28630Q6UXU0 137 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 TRAV25A0A0B4J276 109 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 ZNF493Q6ZR52 646 aa10.43□□□□□ -0.74
RFFL-201ENST00000315249 A0A1B0GV90 55 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 FAM231BA6NCW3 169 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 E7EUB6 86 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 LINC00518Q8N0U6 118 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 RPL32P62910 135 aaKnown RBP10.42□□□□□ -0.74
RFFL-201ENST00000315249 SHISA2Q6UWI4 295 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 LINC01548A6NM66 108 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 PRR20EP86478 221 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 PRR20CP86479 221 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 PRR20DP86480 221 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 PRR20BP86481 221 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 PRR20AP86496 221 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 C3orf79P0CE67 100 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 TAL2Q16559 108 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 C11orf45Q8TAV5 145 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 SMR3AQ99954 134 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 TLN1Q9Y490 2541 aaKnown RBP10.42□□□□□ -0.74
RFFL-201ENST00000315249 ODF3L1Q8IXM7 274 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 TEX22C9J3V5 150 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 K7EQD1 137 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 SAMD5Q5TGI4 173 aa10.42□□□□□ -0.74
RFFL-201ENST00000315249 RBAKDNA6NC62 111 aa10.41□□□□□ -0.74
RFFL-201ENST00000315249 RNF152Q8N8N0 203 aa10.41□□□□□ -0.74
RFFL-201ENST00000315249 LRRK2Q5S007 2527 aa10.41□□□□□ -0.74
RFFL-201ENST00000315249 IL17DQ8TAD2 202 aa10.41□□□□□ -0.74
RFFL-201ENST00000315249 EXPH5Q8NEV8 1989 aa10.41□□□□□ -0.74
RFFL-201ENST00000315249 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
RFFL-201ENST00000315249 HERVK_113P63121 156 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 GAGE2EQ4V326 116 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 GAGE2DQ9UEU5 116 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 COLCA2A8K830 154 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 A8MWP6 167 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 K7EMT4 169 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 SMIM2Q9BVW6 85 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 MEGF9Q9H1U4 602 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 JMJD1CQ15652 2540 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 HIST3H2BBQ8N257 126 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 FAM110AQ9BQ89 295 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 Q8N1Y9 231 aa10.4□□□□□ -0.74
RFFL-201ENST00000315249 TMEM89A2RUT3 159 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 NPYP01303 97 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 LENEPQ9Y5L5 61 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 SH2D6Q7Z4S9 175 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 V9GYV3 84 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 C9JQL5 133 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 ZNF48Q96MX3 618 aaPredicted RBP10.39□□□□□ -0.75
RFFL-201ENST00000315249 TRAV8-4A0A0B4J246 113 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms