RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CMTM2Q8TAZ6 248 aa5.54□□□□□ -1.52
TPM3-203ENST00000312970 PCNPQ8WW12 178 aaKnown RBP5.54□□□□□ -1.52
TPM3-203ENST00000312970 TM2D2Q9BX73 214 aa5.54□□□□□ -1.52
TPM3-203ENST00000312970 SMIM3Q9BZL3 60 aa5.54□□□□□ -1.52
TPM3-203ENST00000312970 OTORQ9NRC9 128 aa5.54□□□□□ -1.52
TPM3-203ENST00000312970 PTTG2Q9NZH5 202 aa5.54□□□□□ -1.52
TPM3-203ENST00000312970 GAGE2DQ9UEU5 116 aa5.54□□□□□ -1.52
TPM3-203ENST00000312970 FLG2Q5D862 2391 aaPredicted RBP5.53□□□□□ -1.52
TPM3-203ENST00000312970 TRAV4A0A0B4J268 109 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 TRAV21A0A0B4J279 112 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 A0A1W2PPV4 95 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 M0R2P5 195 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 EVI2AP22794 236 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 ACOT6Q3I5F7 207 aaPredicted RBP5.53□□□□□ -1.52
TPM3-203ENST00000312970 SH2D6Q7Z4S9 175 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 OR4C5Q8NGB2 326 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 TMEM18Q96B42 140 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 TXNDC17Q9BRA2 123 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 NAGKQ9UJ70 344 aa5.53□□□□□ -1.52
TPM3-203ENST00000312970 IGHV3-16A0A0C4DH30 117 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 C9JCJ5 164 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 EIF3GO75821 320 aaKnown RBP eCLIP5.52□□□□□ -1.53
TPM3-203ENST00000312970 DNAH10OSP0CZ25 163 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 DEFA1P59665 94 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 DEFA3P59666 94 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 GOLT1AQ6ZVE7 132 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 WFDC10BQ8IUB3 73 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 KCNS1Q96KK3 526 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 WFDC1Q9HC57 220 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 TREM1Q9NP99 234 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 MSRB1Q9NZV6 116 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 RPH3ALQ9UNE2 315 aa5.52□□□□□ -1.53
TPM3-203ENST00000312970 A0A087WTM6 91 aa5.51□□□□□ -1.53
TPM3-203ENST00000312970 FUSP35637 526 aaKnown RBP eCLIP5.51□□□□□ -1.53
TPM3-203ENST00000312970 C10orf126Q8N4M7 172 aa5.51□□□□□ -1.53
TPM3-203ENST00000312970 OR10G9Q8NGN4 311 aa5.51□□□□□ -1.53
TPM3-203ENST00000312970 OR10G7Q8NGN6 311 aa5.51□□□□□ -1.53
TPM3-203ENST00000312970 TVP23CQ96ET8 276 aa5.51□□□□□ -1.53
TPM3-203ENST00000312970 SDF2L1Q9HCN8 221 aa5.51□□□□□ -1.53
TPM3-203ENST00000312970 TRAV8-1A0A0A6YYK1 113 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 EPM2AB3EWF7 344 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 HMGB3O15347 200 aaKnown RBP5.5□□□□□ -1.53
TPM3-203ENST00000312970 CIDEAO60543 219 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 TYMSP04818 313 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 CRYGDP07320 174 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 PFN1P07737 140 aaKnown RBP5.5□□□□□ -1.53
TPM3-203ENST00000312970 GATA1P15976 413 aaPredicted RBP5.5□□□□□ -1.53
TPM3-203ENST00000312970 XGP55808 180 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 RAB2AP61019 212 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 ASB13Q8WXK3 278 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 NDFIP1Q9BT67 221 aa5.5□□□□□ -1.53
TPM3-203ENST00000312970 IGHV3-38A0A0C4DH36 116 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 LOC100131303A0A0U1RQF7 123 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 FBLL1A6NHQ2 334 aaKnown RBP5.49□□□□□ -1.53
TPM3-203ENST00000312970 F6UZH7 168 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 TAAR5O14804 337 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 ARL14EPLP0DKL9 152 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 CDC34P49427 236 aaPredicted RBP5.49□□□□□ -1.53
TPM3-203ENST00000312970 GNG5P63218 68 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 ZNF876PQ49A33 203 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 SGK494Q96LW2 274 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 PRADC1Q9BSG0 188 aa5.49□□□□□ -1.53
TPM3-203ENST00000312970 TRAV8-6A0A0B4J262 113 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 TRBV6-4A0A1B0GX49 114 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 RS1O15537 224 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 PSCAO43653 123 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 MBP02144 154 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 TCRAP04437 139 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 STAG3L2P0CL84 134 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 INAFM2P0DMQ5 153 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 PPT1P50897 306 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 ZNF80P51504 273 aaPredicted RBP5.48□□□□□ -1.53
TPM3-203ENST00000312970 KRTAP10-1P60331 282 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 HERV-K104P63124 156 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 SERF2P84101 59 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 LINC01556Q5JQF7 62 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 CFAP126Q5VTH2 177 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 SLC25A29Q8N8R3 303 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 C5orf17Q8NAS9 161 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 OR2G3Q8NGZ4 309 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 SUN5Q8TC36 379 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 PTH2Q96A98 100 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 PSG8Q9UQ74 426 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
TPM3-203ENST00000312970 IBA57-AS1B1ANH7 110 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 GCGP01275 180 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 GCHFRP30047 84 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 FLI1Q01543 452 aaPredicted RBP5.47□□□□□ -1.53
TPM3-203ENST00000312970 RHOHQ15669 191 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 ZFP69Q49AA0 526 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 SMUG1Q53HV7 270 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 OR10J3Q5JRS4 329 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 SAPCD1Q5SSQ6 148 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 DPPA3Q6W0C5 159 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 HSD17B11Q8NBQ5 300 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 FRZBQ92765 325 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 PSMG3Q9BT73 122 aaPredicted RBP5.47□□□□□ -1.53
TPM3-203ENST00000312970 TMEM167BQ9NRX6 74 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 C11orf21Q9P2W6 132 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms