RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ANKRD39Q53RE8 183 aa10.35□□□□□ -0.75
SNED1-201ENST00000310397 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
SNED1-201ENST00000310397 NTN5Q8WTR8 489 aaPredicted RBP10.35□□□□□ -0.75
SNED1-201ENST00000310397 C11orf1Q9H5F2 150 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 KNCNA6PVL3 124 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 PFN2P35080 140 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 FGF23Q9GZV9 251 aaPredicted RBP10.34□□□□□ -0.75
SNED1-201ENST00000310397 GTSF1Q8WW33 167 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 IGFBPL1Q8WX77 278 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 TAX1BP3O14907 124 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 HERV-K104P63124 156 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 CUL9Q8IWT3 2517 aa10.34□□□□□ -0.75
SNED1-201ENST00000310397 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
SNED1-201ENST00000310397 CFHR4Q92496 578 aa10.33□□□□□ -0.76
SNED1-201ENST00000310397 ZNRF2Q8NHG8 242 aa10.33□□□□□ -0.76
SNED1-201ENST00000310397 XCL2Q9UBD3 114 aa10.33□□□□□ -0.76
SNED1-201ENST00000310397 RBMY1FQ15415 496 aaKnown RBP10.33□□□□□ -0.76
SNED1-201ENST00000310397 TRAV12-2A0A075B6T6 113 aa10.33□□□□□ -0.76
SNED1-201ENST00000310397 LINC01619G3V211 115 aa10.33□□□□□ -0.76
SNED1-201ENST00000310397 FOXE3Q13461 319 aa10.33□□□□□ -0.76
SNED1-201ENST00000310397 G3V4G9 280 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 TRAV12-1A0A0B4J245 112 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 IGKV1-17P01599 117 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 CTRLP40313 264 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 IGHV3-16A0A0C4DH30 117 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 I3L2K1 104 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 IGLV2-14P01704 120 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 DEFB130BP0DP73 79 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 DEFB130AP0DP74 79 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 B5MCH6 92 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 TRBV6-1A0A0K0K1D8 114 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 RUSC1-AS1Q66K80 236 aa10.32□□□□□ -0.76
SNED1-201ENST00000310397 K7EIM0 57 aa10.31□□□□□ -0.76
SNED1-201ENST00000310397 LINC00173Q6ZV60 143 aa10.31□□□□□ -0.76
SNED1-201ENST00000310397 NPBQ8NG41 125 aa10.31□□□□□ -0.76
SNED1-201ENST00000310397 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
SNED1-201ENST00000310397 CR1LQ2VPA4 569 aa10.31□□□□□ -0.76
SNED1-201ENST00000310397 CRYBA4P53673 196 aa10.31□□□□□ -0.76
SNED1-201ENST00000310397 RNF152Q8N8N0 203 aa10.31□□□□□ -0.76
SNED1-201ENST00000310397 BAALC-AS2P0C853 105 aa10.3□□□□□ -0.76
SNED1-201ENST00000310397 FXYD2P54710 66 aa10.3□□□□□ -0.76
SNED1-201ENST00000310397 TMEM126AQ9H061 195 aa10.3□□□□□ -0.76
SNED1-201ENST00000310397 K7ENP7 123 aa10.3□□□□□ -0.76
SNED1-201ENST00000310397 HAMPP81172 84 aa10.3□□□□□ -0.76
SNED1-201ENST00000310397 SPATA12Q7Z6I5 190 aa10.3□□□□□ -0.76
SNED1-201ENST00000310397 FAM215AQ9Y5M1 114 aa10.3□□□□□ -0.76
SNED1-201ENST00000310397 ATP6V0E2Q8NHE4 81 aa10.3□□□□□ -0.76
SNED1-201ENST00000310397 PIEZO2Q9H5I5 2752 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 NOTCH2Q04721 2471 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 IGLV11-55A0A075B6I3 123 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 J3QLI3 93 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 WFDC2Q14508 124 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 PATE2Q6UY27 113 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 E9PLD3 99 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 SLC25A29Q8N8R3 303 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 HIVEP2P31629 2446 aa10.29□□□□□ -0.76
SNED1-201ENST00000310397 GNRH2O43555 120 aa10.28□□□□□ -0.76
SNED1-201ENST00000310397 CRLF1O75462 422 aa10.28□□□□□ -0.76
SNED1-201ENST00000310397 C22orf46C9J442 243 aa10.28□□□□□ -0.76
SNED1-201ENST00000310397 ODF1Q14990 250 aa10.28□□□□□ -0.76
SNED1-201ENST00000310397 BUB3O43684 328 aa10.28□□□□□ -0.76
SNED1-201ENST00000310397 ORMDL1Q9P0S3 153 aa10.28□□□□□ -0.76
SNED1-201ENST00000310397 ELANEP08246 267 aa10.27□□□□□ -0.76
SNED1-201ENST00000310397 RPL39LQ96EH5 51 aaKnown RBP10.27□□□□□ -0.76
SNED1-201ENST00000310397 Q9H8V8 135 aa10.27□□□□□ -0.76
SNED1-201ENST00000310397 FOXI1Q12951 378 aa10.27□□□□□ -0.76
SNED1-201ENST00000310397 IGKV1OR2-108A0A075B7D4 117 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 A4D1N5 150 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 ATOX1O00244 68 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 PTPRSQ13332 1948 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 GATA1P15976 413 aaPredicted RBP10.27□□□□□ -0.77
SNED1-201ENST00000310397 HOXB4P17483 251 aaPredicted RBP10.27□□□□□ -0.77
SNED1-201ENST00000310397 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 TOMM6Q96B49 74 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 CTSZQ9UBR2 303 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 H0YGX0 51 aa10.27□□□□□ -0.77
SNED1-201ENST00000310397 GNLYP22749 145 aa10.26□□□□□ -0.77
SNED1-201ENST00000310397 TMEM258P61165 79 aa10.26□□□□□ -0.77
SNED1-201ENST00000310397 C9orf47Q6ZRZ4 202 aa10.26□□□□□ -0.77
SNED1-201ENST00000310397 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
SNED1-201ENST00000310397 C2orf70A6NJV1 201 aa10.26□□□□□ -0.77
SNED1-201ENST00000310397 H3BQ85 93 aa10.26□□□□□ -0.77
SNED1-201ENST00000310397 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
SNED1-201ENST00000310397 NKAPP1Q8N9T2 125 aa10.26□□□□□ -0.77
SNED1-201ENST00000310397 MED14OSP0DP75 135 aa10.25□□□□□ -0.77
SNED1-201ENST00000310397 COL5A1P20908 1838 aaPredicted RBP10.25□□□□□ -0.77
SNED1-201ENST00000310397 BAALCQ8WXS3 180 aa10.25□□□□□ -0.77
SNED1-201ENST00000310397 P0C879 139 aa10.25□□□□□ -0.77
SNED1-201ENST00000310397 DAD1P61803 113 aa10.25□□□□□ -0.77
SNED1-201ENST00000310397 ZFP2Q6ZN57 461 aa10.25□□□□□ -0.77
SNED1-201ENST00000310397 A0A1B0GXF2 115 aa10.25□□□□□ -0.77
SNED1-201ENST00000310397 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
SNED1-201ENST00000310397 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
SNED1-201ENST00000310397 WI2-2373I1.2A0A1W2PRP0 233 aa10.24□□□□□ -0.77
SNED1-201ENST00000310397 CTSGP08311 255 aa10.24□□□□□ -0.77
SNED1-201ENST00000310397 DAZ2Q13117 558 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms