RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.5□□□□□ -2.01
CLOCK-201ENST00000309964 SUMO4Q6EEV6 95 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BHQ93079 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BNQ99877 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BMQ99879 126 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 LINC00474Q9P2X8 69 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 TP53TG1Q9Y2A0 90 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV4-61A0A0C4DH41 118 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 RUSC1-AS1Q66K80 236 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 C9orf47Q6ZRZ4 202 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 UBE2WQ96B02 151 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 LY6HO94772 140 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 C2orf82Q6UX34 121 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 LURAP1LQ8IV03 231 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 EPG5Q9HCE0 2579 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV4-30-2A0A087WSY4 118 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV1-58A0A0C4DH39 117 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE12BA1L429 117 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 C2orf70A6NJV1 201 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 K7EQD1 137 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE7O76087 117 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 IGLV1-47P01700 117 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE12FP0CL80 117 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE12GP0CL81 117 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE12IP0CL82 117 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 WT1P19544 449 aaPredicted RBP2.5□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE2BQ13066 116 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 MAJINQ3KP22 176 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE2EQ4V326 116 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 FAM19A2Q8N3H0 131 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 C11orf45Q8TAV5 145 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE2DQ9UEU5 116 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 KRTAP27-1Q3LI81 207 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 MUC22E2RYF6 1773 aaPredicted RBP2.5□□□□□ -2.01
CLOCK-201ENST00000309964 DNAH12Q6ZR08 3092 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 SMIM27A0A1W2PRY6 76 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 NPSP0C0P6 89 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 BTCP35070 178 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 ZC2HC1BQ5TFG8 222 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 C14orf144Q96I85 54 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 PRO1854Q9UHT4 67 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV7-81A0A0B4J1V7 117 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 G3V318 75 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 NDUFA1O15239 70 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 CTAG1AP78358 180 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 TRAV4A0A0B4J268 109 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 IGLC7A0M8Q6 106 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 F8W1H4 67 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 MPV17L2Q567V2 206 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 CCDC140Q96MF4 163 aa2.5□□□□□ -2.01
CLOCK-201ENST00000309964 Q8N9W7 124 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 NOP10Q9NPE3 64 aaKnown RBP2.49□□□□□ -2.01
CLOCK-201ENST00000309964 ZFAND6Q6FIF0 208 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 ODF3L1Q8IXM7 274 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 SMIM20Q8N5G0 67 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 RNF183Q96D59 192 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 TMEM256-PLSCR3K7ERE1 68 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 IGKV1D-8A0A087WSZ0 117 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 A0A087X0K7 114 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 TRBV6-1A0A0K0K1D8 114 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 ETDCA0A1B0GVM5 59 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 EGR2P11161 476 aaPredicted RBP2.49□□□□□ -2.01
CLOCK-201ENST00000309964 ZNF843Q8N446 348 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 U3KQE9 123 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE12JA6NER3 117 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV3-53P01767 116 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE1Q13065 139 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE4Q13068 117 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 GAGE5Q13069 117 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 TMEM95Q3KNT9 176 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 HIGD2BQ4VC39 106 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 SPRY2O43597 315 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 NHLRC4P0CG21 123 aaPredicted RBP2.49□□□□□ -2.01
CLOCK-201ENST00000309964 GUSBP1Q15486 140 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 MRGPRG-AS1Q2M3A8 158 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 C7orf33Q8WU49 177 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 CAMK2N2Q96S95 79 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 NDUFA12Q9UI09 145 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 FLNBO75369 2602 aaKnown RBP2.49□□□□□ -2.01
CLOCK-201ENST00000309964 SIGMAR1Q99720 223 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 PRSS29PA6NIE9 313 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 LTAP01374 205 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 P0DMU3 169 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 FAM231AP0DMU4 169 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 FAM231CP0DMU5 169 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 LYPD6Q86Y78 171 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 FXYD5Q96DB9 178 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 GFI1Q99684 422 aa2.49□□□□□ -2.01
CLOCK-201ENST00000309964 FLG2Q5D862 2391 aaPredicted RBP2.48□□□□□ -2.01
CLOCK-201ENST00000309964 A0A087WWL8 130 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 Q6YL49 198 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 RNF144BQ7Z419 303 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 RNF185Q96GF1 192 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 ZC2HC1AQ96GY0 325 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 HIST1H2BLQ99880 126 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV3-73A0A0B4J1V6 119 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 IGHV4-39P01824 125 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 WDR86Q86TI4 376 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 Q8TAT8 98 aa2.48□□□□□ -2.01
CLOCK-201ENST00000309964 RIPPLY3P57055 190 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms