RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SLAQ13239 276 aa12.69□□□□□ -0.38
SSSCA1-201ENST00000309328 ZNF876PQ49A33 203 aa12.69□□□□□ -0.38
SSSCA1-201ENST00000309328 CT83Q5H943 113 aa12.69□□□□□ -0.38
SSSCA1-201ENST00000309328 RPP21Q9H633 154 aaKnown RBP12.69□□□□□ -0.38
SSSCA1-201ENST00000309328 SCRT2Q9NQ03 307 aa12.69□□□□□ -0.38
SSSCA1-201ENST00000309328 TMSB15BA0A087X1C1 80 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 A0A1W2PPQ1 181 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 LINC00862A6NCI5 91 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 H3BVH4 76 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 ERVFC1-1P60608 527 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 ZFP82Q8N141 532 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 C15orf54Q8N8G6 183 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 NUDT10Q8NFP7 164 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 NUDT11Q96G61 164 aa12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 MRPL16Q9NX20 251 aaKnown RBP12.68□□□□□ -0.38
SSSCA1-201ENST00000309328 TRAV4A0A0B4J268 109 aa12.67□□□□□ -0.38
SSSCA1-201ENST00000309328 A8MWV9 139 aa12.67□□□□□ -0.38
SSSCA1-201ENST00000309328 F2Z2F3 143 aa12.67□□□□□ -0.38
SSSCA1-201ENST00000309328 PNRC1Q12796 327 aaPredicted RBP12.67□□□□□ -0.38
SSSCA1-201ENST00000309328 SSBP4Q9BWG4 385 aaPredicted RBP12.67□□□□□ -0.38
SSSCA1-201ENST00000309328 OSTCQ9NRP0 149 aa12.67□□□□□ -0.38
SSSCA1-201ENST00000309328 GRIFINA4D1Z8 144 aa12.66□□□□□ -0.38
SSSCA1-201ENST00000309328 A8MWL6 223 aa12.66□□□□□ -0.38
SSSCA1-201ENST00000309328 SNAI2O43623 268 aa12.66□□□□□ -0.38
SSSCA1-201ENST00000309328 GATCO43716 136 aaKnown RBP12.66□□□□□ -0.38
SSSCA1-201ENST00000309328 RPL19P84098 196 aaKnown RBP12.66□□□□□ -0.38
SSSCA1-201ENST00000309328 ZFAND6Q6FIF0 208 aa12.66□□□□□ -0.38
SSSCA1-201ENST00000309328 COMMD7Q86VX2 200 aa12.66□□□□□ -0.38
SSSCA1-201ENST00000309328 F5H768 121 aa12.65□□□□□ -0.38
SSSCA1-201ENST00000309328 HTN3P15516 51 aa12.65□□□□□ -0.38
SSSCA1-201ENST00000309328 RPL23P62829 140 aaKnown RBP12.65□□□□□ -0.38
SSSCA1-201ENST00000309328 ADIRFQ15847 76 aa12.65□□□□□ -0.38
SSSCA1-201ENST00000309328 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
SSSCA1-201ENST00000309328 OR4C5Q8NGB2 326 aa12.65□□□□□ -0.38
SSSCA1-201ENST00000309328 ISOC2Q96AB3 205 aa12.65□□□□□ -0.38
SSSCA1-201ENST00000309328 RNASE7Q9H1E1 156 aaKnown RBP12.65□□□□□ -0.38
SSSCA1-201ENST00000309328 FAM231BA6NCW3 169 aa12.64□□□□□ -0.39
SSSCA1-201ENST00000309328 NXPH4O95158 308 aa12.64□□□□□ -0.39
SSSCA1-201ENST00000309328 CACNG7P62955 275 aa12.64□□□□□ -0.39
SSSCA1-201ENST00000309328 ZNF575Q86XF7 245 aa12.64□□□□□ -0.39
SSSCA1-201ENST00000309328 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
SSSCA1-201ENST00000309328 SFRP2Q96HF1 295 aa12.64□□□□□ -0.39
SSSCA1-201ENST00000309328 H3BNG1 76 aa12.63□□□□□ -0.39
SSSCA1-201ENST00000309328 RHODO00212 210 aa12.63□□□□□ -0.39
SSSCA1-201ENST00000309328 IGLC6P0CF74 106 aa12.63□□□□□ -0.39
SSSCA1-201ENST00000309328 SPANXN1Q5VSR9 72 aa12.63□□□□□ -0.39
SSSCA1-201ENST00000309328 WDR73Q6P4I2 378 aa12.63□□□□□ -0.39
SSSCA1-201ENST00000309328 ZFP2Q6ZN57 461 aa12.63□□□□□ -0.39
SSSCA1-201ENST00000309328 GFRA4Q9GZZ7 299 aa12.63□□□□□ -0.39
SSSCA1-201ENST00000309328 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
SSSCA1-201ENST00000309328 IGLL5B9A064 214 aa12.62□□□□□ -0.39
SSSCA1-201ENST00000309328 IGHV4-4A0A075B6R2 117 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 M0R381 172 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 RS1O15537 224 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 CTRLP40313 264 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 CFAP126Q5VTH2 177 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 OR10G8Q8NGN5 311 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 TSKUQ8WUA8 353 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 PRO0255Q9UI72 69 aa12.61□□□□□ -0.39
SSSCA1-201ENST00000309328 CSMD3Q7Z407 3707 aa12.6□□□□□ -0.39
SSSCA1-201ENST00000309328 PPP1R2P9O14990 202 aa12.6□□□□□ -0.39
SSSCA1-201ENST00000309328 FOXA3P55318 350 aaPredicted RBP12.6□□□□□ -0.39
SSSCA1-201ENST00000309328 DMRTA1Q5VZB9 504 aa12.6□□□□□ -0.39
SSSCA1-201ENST00000309328 CNFNQ9BYD5 112 aa12.6□□□□□ -0.39
SSSCA1-201ENST00000309328 DYNC2H1Q8NCM8 4307 aaKnown RBP12.59□□□□□ -0.39
SSSCA1-201ENST00000309328 F8W036 122 aa12.59□□□□□ -0.39
SSSCA1-201ENST00000309328 TMEM88Q6PEY1 159 aa12.59□□□□□ -0.39
SSSCA1-201ENST00000309328 OR10AG1Q8NH19 301 aa12.59□□□□□ -0.39
SSSCA1-201ENST00000309328 BORCS7Q96B45 105 aa12.59□□□□□ -0.39
SSSCA1-201ENST00000309328 AP1S3Q96PC3 154 aa12.59□□□□□ -0.39
SSSCA1-201ENST00000309328 TPPP3Q9BW30 176 aa12.59□□□□□ -0.39
SSSCA1-201ENST00000309328 HHLA3Q9XRX5 114 aa12.59□□□□□ -0.39
SSSCA1-201ENST00000309328 STARD9Q9P2P6 4700 aa12.58□□□□□ -0.4
SSSCA1-201ENST00000309328 IGHV3-53P01767 116 aa12.58□□□□□ -0.4
SSSCA1-201ENST00000309328 GZMBP10144 247 aa12.58□□□□□ -0.4
SSSCA1-201ENST00000309328 HOXA5P20719 270 aa12.58□□□□□ -0.4
SSSCA1-201ENST00000309328 POM121L12Q8N7R1 296 aa12.58□□□□□ -0.4
SSSCA1-201ENST00000309328 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
SSSCA1-201ENST00000309328 TRAV26-1A0A087WT03 109 aa12.57□□□□□ -0.4
SSSCA1-201ENST00000309328 MT-ND4LP03901 98 aa12.57□□□□□ -0.4
SSSCA1-201ENST00000309328 TRGC1P0CF51 173 aa12.57□□□□□ -0.4
SSSCA1-201ENST00000309328 FHL2Q14192 279 aa12.57□□□□□ -0.4
SSSCA1-201ENST00000309328 LYZL1Q6UWQ5 148 aa12.57□□□□□ -0.4
SSSCA1-201ENST00000309328 V9GYV3 84 aa12.57□□□□□ -0.4
SSSCA1-201ENST00000309328 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
SSSCA1-201ENST00000309328 PAX4O43316 350 aa12.56□□□□□ -0.4
SSSCA1-201ENST00000309328 SMIM17P0DL12 118 aa12.56□□□□□ -0.4
SSSCA1-201ENST00000309328 GATA1P15976 413 aaPredicted RBP12.56□□□□□ -0.4
SSSCA1-201ENST00000309328 ANAPC16Q96DE5 110 aa12.56□□□□□ -0.4
SSSCA1-201ENST00000309328 MUC4Q99102 2169 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 HIGD1CA8MV81 97 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 CRYBA4P53673 196 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 RHOHQ15669 191 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 SH2D6Q7Z4S9 175 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 GTSF1Q8WW33 167 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 PRADC1Q9BSG0 188 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms