RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 LINC01546A6NGU7 62 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 ASIPP42127 132 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 ZNF575Q86XF7 245 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 OR10J6PQ8NGY7 276 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 SPATA25Q9BR10 227 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 PTH2Q96A98 100 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 USP9YO00507 2555 aaPredicted RBP8.54□□□□□ -1.04
PTPN7-201ENST00000309017 H7C2G1 150 aa8.54□□□□□ -1.04
PTPN7-201ENST00000309017 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
PTPN7-201ENST00000309017 CLUHP3Q96NS8 147 aa8.54□□□□□ -1.04
PTPN7-201ENST00000309017 DPH3P1Q9H4G8 78 aa8.54□□□□□ -1.04
PTPN7-201ENST00000309017 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
PTPN7-201ENST00000309017 IGF1P05019 195 aa8.54□□□□□ -1.04
PTPN7-201ENST00000309017 DEFB1P60022 68 aa8.54□□□□□ -1.04
PTPN7-201ENST00000309017 FOXI1Q12951 378 aa8.54□□□□□ -1.04
PTPN7-201ENST00000309017 FAM110DQ8TAY7 271 aaPredicted RBP8.54□□□□□ -1.04
PTPN7-201ENST00000309017 RNASE4P34096 147 aaKnown RBP8.53□□□□□ -1.04
PTPN7-201ENST00000309017 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 ZFAND3Q9H8U3 227 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 HIVEP3Q5T1R4 2406 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 PLEKHB2Q96CS7 222 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 PKD1L2Q7Z442 2459 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 ZFP2Q6ZN57 461 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 Q8N9W7 124 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 ZNF292O60281 2723 aa8.53□□□□□ -1.04
PTPN7-201ENST00000309017 TRAV21A0A0B4J279 112 aa8.52□□□□□ -1.04
PTPN7-201ENST00000309017 ODF3BA8MYP8 253 aa8.52□□□□□ -1.04
PTPN7-201ENST00000309017 MORN3Q6PF18 240 aaPredicted RBP8.52□□□□□ -1.04
PTPN7-201ENST00000309017 TOMM6Q96B49 74 aa8.52□□□□□ -1.05
PTPN7-201ENST00000309017 TRAV8-2A0A0B4J237 113 aa8.52□□□□□ -1.05
PTPN7-201ENST00000309017 Q8NA96 180 aa8.52□□□□□ -1.05
PTPN7-201ENST00000309017 TRAV26-1A0A087WT03 109 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 PRR9Q5T870 116 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 NEXN-AS1Q8NBZ9 246 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 RASL10AQ92737 203 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 DUSP14O95147 198 aaKnown RBP8.51□□□□□ -1.05
PTPN7-201ENST00000309017 Q1RN00 199 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 ANXA2RQ3ZCQ2 193 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 CCDC140Q96MF4 163 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 MSRB2Q9Y3D2 182 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 LINC01548A6NM66 108 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 MINOS1Q5TGZ0 78 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 PRO0461Q9UI25 63 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 TP53TG1Q9Y2A0 90 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 MINOS1-NBL1R4GNA1 71 aa8.51□□□□□ -1.05
PTPN7-201ENST00000309017 OOSP1A8MZH6 123 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 CCL21O00585 134 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 TSPAN13O95857 204 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 C9orf47Q6ZRZ4 202 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 TMEM219Q86XT9 240 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 USP9XQ93008 2570 aaPredicted RBP8.5□□□□□ -1.05
PTPN7-201ENST00000309017 A8MWV9 139 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 FAM74A4Q5TZK3 123 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 IGHV3OR16-10A0A075B7F0 116 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 CLPSL1A2RUU4 121 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 GNRH2O43555 120 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 MT-ATP8P03928 68 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 DOPEY1Q5JWR5 2465 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 CFAP126Q5VTH2 177 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 C9orf139Q6ZV77 190 aa8.5□□□□□ -1.05
PTPN7-201ENST00000309017 F6UB75 175 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 IGF2-ASQ6U949 168 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 KIR2DL4Q99706 377 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 C11orf86A6NJI1 115 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
PTPN7-201ENST00000309017 PPDPFLQ8WWR9 84 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 PSMG3-AS1Q96PY0 264 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 AKAP13Q12802 2813 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 SAA4P35542 130 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 RAX2Q96IS3 184 aa8.49□□□□□ -1.05
PTPN7-201ENST00000309017 IGHV3-64A0A075B6Q5 118 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 TRBV7-1A0A0A6YYK4 115 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 IGHV3-11P01762 117 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 Q8N6K4 173 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 LINC00477Q96M19 166 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 ZNF256Q9Y2P7 627 aaPredicted RBP8.48□□□□□ -1.05
PTPN7-201ENST00000309017 A0A087WWL8 130 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 ZFP36P26651 326 aaKnown RBP8.48□□□□□ -1.05
PTPN7-201ENST00000309017 CRYBA4P53673 196 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 TCTEX1D4Q5JR98 221 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 MRPL53Q96EL3 112 aaKnown RBP8.48□□□□□ -1.05
PTPN7-201ENST00000309017 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 PPP1R17O96001 155 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 SRD5A1P18405 259 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 NFE4Q86UQ8 179 aa8.48□□□□□ -1.05
PTPN7-201ENST00000309017 RPL39P62891 51 aaKnown RBP8.47□□□□□ -1.05
PTPN7-201ENST00000309017 C20orf173Q96LM9 149 aa8.47□□□□□ -1.05
PTPN7-201ENST00000309017 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
PTPN7-201ENST00000309017 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
PTPN7-201ENST00000309017 BEX4Q9NWD9 120 aaPredicted RBP8.47□□□□□ -1.05
PTPN7-201ENST00000309017 IGHV4-4A0A075B6R2 117 aa8.47□□□□□ -1.05
PTPN7-201ENST00000309017 TCL1BO95988 128 aa8.47□□□□□ -1.05
PTPN7-201ENST00000309017 FAM159AQ6UWV7 190 aa8.47□□□□□ -1.05
PTPN7-201ENST00000309017 TEN1Q86WV5 123 aa8.47□□□□□ -1.05
PTPN7-201ENST00000309017 UBTD1Q9HAC8 227 aa8.47□□□□□ -1.05
PTPN7-201ENST00000309017 Q6ZUT4 128 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms