RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CCL24O00175 119 aa8.8□□□□□ -1
PCDHGC3-201ENST00000308177 DNAL4O96015 105 aa8.8□□□□□ -1
PCDHGC3-201ENST00000308177 C9orf47Q6ZRZ4 202 aa8.8□□□□□ -1
PCDHGC3-201ENST00000308177 ZNF124Q15973 351 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 CHAC1Q9BUX1 264 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 MRPL35Q9NZE8 188 aaKnown RBP8.79□□□□□ -1
PCDHGC3-201ENST00000308177 IGHV4OR15-8A0A075B7B6 117 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 A0A087WW49 117 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 A0A087WX48 190 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 TMEM141Q96I45 108 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 TSSC4Q9Y5U2 329 aaPredicted RBP8.79□□□□□ -1
PCDHGC3-201ENST00000308177 NACAE9PAV3 2078 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 AZU1P20160 251 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 LOXL1Q08397 574 aaPredicted RBP8.79□□□□□ -1
PCDHGC3-201ENST00000308177 PMVKQ15126 192 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 ESDP10768 282 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 SPXQ9BT56 116 aa8.79□□□□□ -1
PCDHGC3-201ENST00000308177 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 TMEM89A2RUT3 159 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 CD5LO43866 347 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 MALP21145 153 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 KIR3DS1Q14943 382 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 MORN3Q6PF18 240 aaPredicted RBP8.78□□□□□ -1
PCDHGC3-201ENST00000308177 SRSF2Q01130 221 aaKnown RBP8.78□□□□□ -1
PCDHGC3-201ENST00000308177 PAX2Q02962 417 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 LINC00322Q6ZN03 302 aaPredicted RBP8.78□□□□□ -1
PCDHGC3-201ENST00000308177 MTURNQ8N3F0 131 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 COX8AP10176 69 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 DEFB1P60022 68 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 MAJINQ3KP22 176 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 ZNF493Q6ZR52 646 aa8.78□□□□□ -1
PCDHGC3-201ENST00000308177 SPAG8Q99932 426 aaPredicted RBP8.78□□□□□ -1
PCDHGC3-201ENST00000308177 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 F8VRH5 84 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 IGF1P05019 195 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 CFHR3Q02985 330 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE1Q13065 139 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE4Q13068 117 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE5Q13069 117 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 MLST8Q9BVC4 326 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 C2orf70A6NJV1 201 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 TIMM21Q9BVV7 248 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 LRRK2Q5S007 2527 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 ZFYVE26Q68DK2 2539 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 DKK2Q9UBU2 259 aa8.77□□□□□ -1.01
PCDHGC3-201ENST00000308177 TRBV7-9A0A0J9YWB2 115 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 PCP4P48539 62 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 RASL10AQ92737 203 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 SETD2Q9BYW2 2564 aaPredicted RBP8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 LAMA3Q16787 3333 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE12BA1L429 117 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE7O76087 117 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 ZNRF2Q8NHG8 242 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 M0R2P5 195 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 CTRLP40313 264 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 ERG28Q9UKR5 140 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 ABCA12Q86UK0 2595 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 HLA-DRB4P13762 266 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 C3orf56Q8N813 242 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 HLA-DRB4X5D2U9 266 aa8.76□□□□□ -1.01
PCDHGC3-201ENST00000308177 LINC00173Q6ZV60 143 aa8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 APRG1Q8IVJ8 170 aa8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 KIR2DL5BA0A0G2JN68 375 aa8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 KIR2DL5BA0A0G2JPC4 375 aa8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 KIR2DL5AQ8N109 375 aa8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 RNASE1P07998 156 aaKnown RBP8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 IGHG4P01861 327 aa8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 COX11Q9Y6N1 276 aa8.75□□□□□ -1.01
PCDHGC3-201ENST00000308177 K7EMI3 77 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 Q8N6K4 173 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 PRRC2AP48634 2157 aaKnown RBP8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 LINC00158P58513 81 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 TDRG1Q3Y452 100 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 A0A1B0GXF2 115 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 NPC2P61916 151 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 UBE2V1Q13404 147 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 RPL39LQ96EH5 51 aaKnown RBP8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 YPEL4Q96NS1 127 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 ADAMTS20P59510 1910 aa8.74□□□□□ -1.01
PCDHGC3-201ENST00000308177 CRPP02741 224 aa8.73□□□□□ -1.01
PCDHGC3-201ENST00000308177 ZNF80P51504 273 aaPredicted RBP8.73□□□□□ -1.01
PCDHGC3-201ENST00000308177 MYMXA0A1B0GTQ4 84 aa8.73□□□□□ -1.01
PCDHGC3-201ENST00000308177 MBD6Q96DN6 1003 aa8.73□□□□□ -1.01
PCDHGC3-201ENST00000308177 LRRC75A-AS1Q8N1F1 130 aa8.73□□□□□ -1.01
PCDHGC3-201ENST00000308177 BRCA2P51587 3418 aa8.73□□□□□ -1.01
PCDHGC3-201ENST00000308177 MYCNOSP40205 109 aa8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 U3KQE9 123 aa8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 RBMY1BA6NDE4 496 aaKnown RBP8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 RBMY1EA6NEQ0 496 aaKnown RBP8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 RBMY1DP0C7P1 496 aaKnown RBP8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 RBMY1A1P0DJD3 496 aaKnown RBP8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 RBMY1CP0DJD4 496 aa8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 PRIMA1Q86XR5 153 aa8.72□□□□□ -1.01
PCDHGC3-201ENST00000308177 ZNF843Q8N446 348 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms