RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 H3BVH4 76 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 SNAI2O43623 268 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 NUPR1O60356 82 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 S100A6P06703 90 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 AKR1D1P51857 326 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 CMC4P56277 68 aaPredicted RBP5.1□□□□□ -1.59
PTCD2-201ENST00000308077 RAB4BP61018 213 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 SSTP61278 116 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 SLAQ13239 276 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 WDR73Q6P4I2 378 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 STHQ8IWL8 128 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 TP53TG3Q9ULZ0 132 aa5.1□□□□□ -1.59
PTCD2-201ENST00000308077 SPRY2O43597 315 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 HLA-DQA1P01909 254 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 MT-ND6P03923 174 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 RNASE3P12724 160 aaKnown RBP5.09□□□□□ -1.59
PTCD2-201ENST00000308077 RIGQ13278 110 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 COX19Q49B96 90 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 MCRIP2Q9BUT9 160 aaKnown RBP5.09□□□□□ -1.59
PTCD2-201ENST00000308077 CNFNQ9BYD5 112 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 MSRB1Q9NZV6 116 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 OR5AL1P0C617 328 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 NTF3P20783 257 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 ASIPP42127 132 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 LINC00310P59036 64 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 TDRG1Q3Y452 100 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 DNLZQ5SXM8 178 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 FAM159AQ6UWV7 190 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 HIST3H2BBQ8N257 126 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 TMEM256Q8N2U0 113 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 DEFB125Q8N687 156 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 GATD1Q8NB37 220 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 OR10AG1Q8NH19 301 aa5.09□□□□□ -1.59
PTCD2-201ENST00000308077 IGHV1OR15-1A0A075B7D0 117 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 APCSP02743 223 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 PRM2P04554 102 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 GIG44P09565 113 aaPredicted RBP5.08□□□□□ -1.6
PTCD2-201ENST00000308077 Q8N1Y9 231 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 BORCS7Q96B45 105 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 MUC4Q99102 2169 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 SCRT2Q9NQ03 307 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 XCL2Q9UBD3 114 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 TIMM8BQ9Y5J9 83 aaPredicted RBP5.08□□□□□ -1.6
PTCD2-201ENST00000308077 IGHV3-16A0A0C4DH30 117 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 A0A1B0GW15 77 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 RPL35AP18077 110 aaKnown RBP5.08□□□□□ -1.6
PTCD2-201ENST00000308077 TWIST1Q15672 202 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 ZNF493Q6ZR52 646 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 GTSCR1Q86UQ5 136 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 KCNS1Q96KK3 526 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 MDFICQ9P1T7 246 aa5.08□□□□□ -1.6
PTCD2-201ENST00000308077 IGHV4-4A0A075B6R2 117 aa5.07□□□□□ -1.6
PTCD2-201ENST00000308077 INSP01308 110 aa5.07□□□□□ -1.6
PTCD2-201ENST00000308077 MED14OSP0DP75 135 aa5.07□□□□□ -1.6
PTCD2-201ENST00000308077 S100A4P26447 101 aaKnown RBP5.07□□□□□ -1.6
PTCD2-201ENST00000308077 COA6Q5JTJ3 125 aaKnown RBP5.07□□□□□ -1.6
PTCD2-201ENST00000308077 CDPF1Q6NVV7 123 aa5.07□□□□□ -1.6
PTCD2-201ENST00000308077 LINC00518Q8N0U6 118 aa5.07□□□□□ -1.6
PTCD2-201ENST00000308077 C1orf158Q8N1D5 194 aa5.07□□□□□ -1.6
PTCD2-201ENST00000308077 C9orf85Q96MD7 179 aa5.07□□□□□ -1.6
PTCD2-201ENST00000308077 AMBPP02760 352 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 SRIP30626 198 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 AMN1Q8IY45 258 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 NOTCH3Q9UM47 2321 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 LOC102724200A0A096LPH7 203 aaPredicted RBP5.06□□□□□ -1.6
PTCD2-201ENST00000308077 CBY3A6NI87 242 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 M0R381 172 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 NXPH4O95158 308 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 S100A8P05109 93 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 HTN1P15515 57 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 NUTF2P61970 127 aaKnown RBP5.06□□□□□ -1.6
PTCD2-201ENST00000308077 CACNG7P62955 275 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 IQCJQ1A5X6 159 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 SPANXN1Q5VSR9 72 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 FAM104BQ5XKR9 115 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 RNF185Q96GF1 192 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 HIST1H2BLQ99880 126 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 C20orf144Q9BQM9 153 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 LINC00467Q9BRT7 94 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 ALKBH7Q9BT30 221 aaPredicted RBP5.06□□□□□ -1.6
PTCD2-201ENST00000308077 TMEM191AQ9H0A3 160 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 PHLDA3Q9Y5J5 127 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 TENM2Q9NT68 2774 aa5.06□□□□□ -1.6
PTCD2-201ENST00000308077 TRGV11A0A075B6L2 103 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 FABP4P15090 132 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 EVI2AP22794 236 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 KRTAP10-11P60412 298 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 CSNK1G2-AS1Q8NCQ2 148 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 OR10D4PQ8NGN7 298 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 RCHY1Q96PM5 261 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 LINC01587Q99440 93 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 DYNC2H1Q8NCM8 4307 aaKnown RBP5.05□□□□□ -1.6
PTCD2-201ENST00000308077 IGHV3OR16-12A0A075B7B8 117 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 AZU1P20160 251 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 MRPL51Q4U2R6 128 aaKnown RBP5.05□□□□□ -1.6
PTCD2-201ENST00000308077 SAMD5Q5TGI4 173 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 MORN3Q6PF18 240 aaPredicted RBP5.05□□□□□ -1.6
PTCD2-201ENST00000308077 C11orf72Q8NBR9 251 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 JPT2Q9H910 190 aa5.05□□□□□ -1.6
PTCD2-201ENST00000308077 SERF1AO75920 110 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms