RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 SLC25A20O43772 301 aa10.4□□□□□ -0.74
SEC23A-201ENST00000307712 NPBQ8NG41 125 aa10.4□□□□□ -0.74
SEC23A-201ENST00000307712 CHD8Q9HCK8 2581 aa10.4□□□□□ -0.75
SEC23A-201ENST00000307712 C10orf126Q8N4M7 172 aa10.39□□□□□ -0.75
SEC23A-201ENST00000307712 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
SEC23A-201ENST00000307712 M0R2P5 195 aa10.39□□□□□ -0.75
SEC23A-201ENST00000307712 RNF185Q96GF1 192 aa10.39□□□□□ -0.75
SEC23A-201ENST00000307712 PTPN13Q12923 2485 aa10.39□□□□□ -0.75
SEC23A-201ENST00000307712 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
SEC23A-201ENST00000307712 ADARB2-AS1A8MUL3 147 aa10.39□□□□□ -0.75
SEC23A-201ENST00000307712 RBAKDNA6NC62 111 aa10.38□□□□□ -0.75
SEC23A-201ENST00000307712 LGALS1P09382 135 aaKnown RBP10.38□□□□□ -0.75
SEC23A-201ENST00000307712 IGKV3OR2-268A0A0C4DH90 116 aa10.38□□□□□ -0.75
SEC23A-201ENST00000307712 NTN5Q8WTR8 489 aaPredicted RBP10.38□□□□□ -0.75
SEC23A-201ENST00000307712 DUX3Q96PT4 197 aa10.38□□□□□ -0.75
SEC23A-201ENST00000307712 BPESC1Q9GZL8 116 aa10.38□□□□□ -0.75
SEC23A-201ENST00000307712 DYNLRB2Q8TF09 96 aa10.37□□□□□ -0.75
SEC23A-201ENST00000307712 DUX5Q96PT3 197 aa10.37□□□□□ -0.75
SEC23A-201ENST00000307712 AGRNO00468 2067 aa10.37□□□□□ -0.75
SEC23A-201ENST00000307712 PIP4P1Q86T03 277 aa10.37□□□□□ -0.75
SEC23A-201ENST00000307712 H3BUX3 64 aa10.37□□□□□ -0.75
SEC23A-201ENST00000307712 UBE2E1P51965 193 aa10.37□□□□□ -0.75
SEC23A-201ENST00000307712 BAALCQ8WXS3 180 aa10.37□□□□□ -0.75
SEC23A-201ENST00000307712 ATP5J2P56134 94 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 RPL39P62891 51 aaKnown RBP10.36□□□□□ -0.75
SEC23A-201ENST00000307712 B5MCH6 92 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 INSL3P51460 131 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 KLRB1Q12918 225 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 TEN1Q86WV5 123 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 TIMM21Q9BVV7 248 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 SPEGQ15772 3267 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 MYO9AB2RTY4 2548 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 TRAV12-2A0A075B6T6 113 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 ZFP2Q6ZN57 461 aa10.36□□□□□ -0.75
SEC23A-201ENST00000307712 C11orf86A6NJI1 115 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 Q8N9W7 124 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 KLK9Q9UKQ9 250 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 TRAV12-1A0A0B4J245 112 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 CRYBA4P53673 196 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 VPS13AQ96RL7 3174 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 FAM223BA6NKX1 122 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 KNCNA6PVL3 124 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 FAM223AQ8IWN6 122 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 HHLA3Q9XRX5 114 aa10.35□□□□□ -0.75
SEC23A-201ENST00000307712 SS18L2Q9UHA2 77 aa10.34□□□□□ -0.75
SEC23A-201ENST00000307712 SMAD5-AS1Q9Y6J3 95 aa10.34□□□□□ -0.75
SEC23A-201ENST00000307712 A4D1N5 150 aa10.34□□□□□ -0.75
SEC23A-201ENST00000307712 DAZ1Q9NQZ3 744 aaKnown RBP10.34□□□□□ -0.75
SEC23A-201ENST00000307712 SZT2Q5T011 3432 aa10.34□□□□□ -0.75
SEC23A-201ENST00000307712 CFC1BP0CG36 223 aa10.34□□□□□ -0.75
SEC23A-201ENST00000307712 CFC1P0CG37 223 aa10.34□□□□□ -0.75
SEC23A-201ENST00000307712 SPINK13Q1W4C9 94 aa10.34□□□□□ -0.75
SEC23A-201ENST00000307712 ZNF625Q96I27 306 aaPredicted RBP10.34□□□□□ -0.75
SEC23A-201ENST00000307712 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
SEC23A-201ENST00000307712 MT-ATP8P03928 68 aa10.33□□□□□ -0.76
SEC23A-201ENST00000307712 RNASE13Q5GAN3 156 aaKnown RBP10.33□□□□□ -0.76
SEC23A-201ENST00000307712 ZNF48Q96MX3 618 aaPredicted RBP10.33□□□□□ -0.76
SEC23A-201ENST00000307712 IGF1P05019 195 aa10.33□□□□□ -0.76
SEC23A-201ENST00000307712 HOXB4P17483 251 aaPredicted RBP10.33□□□□□ -0.76
SEC23A-201ENST00000307712 ANKRD29Q8N6D5 301 aa10.33□□□□□ -0.76
SEC23A-201ENST00000307712 H3BMM0 161 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 LINC01587Q99440 93 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 TOMM7Q9P0U1 55 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 DNAL4O96015 105 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 MRPL53Q96EL3 112 aaKnown RBP10.32□□□□□ -0.76
SEC23A-201ENST00000307712 TNRC6BQ9UPQ9 1833 aaKnown RBP10.32□□□□□ -0.76
SEC23A-201ENST00000307712 YAE1D1Q9NRH1 226 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 C11orf21Q9P2W6 132 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 LENEPQ9Y5L5 61 aa10.32□□□□□ -0.76
SEC23A-201ENST00000307712 C9orf47Q6ZRZ4 202 aa10.31□□□□□ -0.76
SEC23A-201ENST00000307712 USMG5Q96IX5 58 aa10.31□□□□□ -0.76
SEC23A-201ENST00000307712 JPT2Q9H910 190 aa10.31□□□□□ -0.76
SEC23A-201ENST00000307712 TRPT1Q86TN4 253 aaKnown RBP10.31□□□□□ -0.76
SEC23A-201ENST00000307712 LY6G5BQ8NDX9 201 aa10.31□□□□□ -0.76
SEC23A-201ENST00000307712 PHLDA1Q8WV24 401 aaPredicted RBP10.31□□□□□ -0.76
SEC23A-201ENST00000307712 ITLN2Q8WWU7 325 aaPredicted RBP10.31□□□□□ -0.76
SEC23A-201ENST00000307712 ADAMTS20P59510 1910 aa10.31□□□□□ -0.76
SEC23A-201ENST00000307712 CELSR3Q9NYQ7 3312 aa10.31□□□□□ -0.76
SEC23A-201ENST00000307712 TRGV11A0A075B6L2 103 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 LINC01548A6NM66 108 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 NDUFA4O00483 81 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 UCNP55089 124 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 SRSF2Q01130 221 aaKnown RBP10.3□□□□□ -0.76
SEC23A-201ENST00000307712 RASL10AQ92737 203 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 A0A0J9YXV3 536 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 UBE2L6O14933 153 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 C15orf53Q8NAA6 179 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 NDUFA12Q9UI09 145 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 TCL1BO95988 128 aa10.3□□□□□ -0.76
SEC23A-201ENST00000307712 IGHV1-69DA0A0B4J2H0 117 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 CENPVL3A0A0U1RRI6 287 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms