RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 OXLD1Q5BKU9 147 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 F8W735 103 aaPredicted RBP7.05□□□□□ -1.28
PTPRE-202ENST00000306042 HLA-DRB4P13762 266 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 C11orf45Q8TAV5 145 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 C11orf68Q9H3H3 251 aaKnown RBP7.05□□□□□ -1.28
PTPRE-202ENST00000306042 SIGLEC8Q9NYZ4 499 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 HLA-DRB4X5D2U9 266 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 EIF4EBP1Q13541 118 aaPredicted RBP7.05□□□□□ -1.28
PTPRE-202ENST00000306042 C10orf126Q8N4M7 172 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 HIST1H4GQ99525 98 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 ESM1Q9NQ30 184 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 A0A0C4DFX4 3053 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 DEFB1P60022 68 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 COX11Q9Y6N1 276 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 IGLL5B9A064 214 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 H7C2G1 150 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 IGLV1-40P01703 118 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 GAGE6Q13070 117 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 C18orf65Q6ZTR6 163 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 PRO1933Q9H354 126 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 LAMTOR2Q9Y2Q5 125 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 NACAE9PAV3 2078 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 I3L3M4 83 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 ADAMTSL5Q6ZMM2 481 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 C11orf52Q96A22 123 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 NUPR2A6NF83 97 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 PRAC2D3DTV9 90 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 LTAP01374 205 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 ANGP03950 147 aaKnown RBP7.04□□□□□ -1.28
PTPRE-202ENST00000306042 VAMP3Q15836 100 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 C6orf226Q5I0X4 101 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 ARL6IP6Q8N6S5 226 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 C20orf144Q9BQM9 153 aa7.04□□□□□ -1.28
PTPRE-202ENST00000306042 A0A087X0K7 114 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 ASPHD1Q5U4P2 390 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 SERF1AO75920 110 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 TNFRSF6BO95407 300 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 COX6CP09669 75 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 GYPEP15421 78 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 JOSD1Q15040 202 aaPredicted RBP7.03□□□□□ -1.28
PTPRE-202ENST00000306042 NIT1Q86X76 327 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 CHTOPQ9Y3Y2 248 aaKnown RBP7.03□□□□□ -1.28
PTPRE-202ENST00000306042 HELZ2Q9BYK8 2649 aaKnown RBP7.03□□□□□ -1.28
PTPRE-202ENST00000306042 SMIM9A6NGZ8 99 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 K7EQG2 157 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 PRB2P02812 416 aaPredicted RBP7.03□□□□□ -1.28
PTPRE-202ENST00000306042 PAX2Q02962 417 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 FAM231DQ6ZW35 169 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 ATOH7Q8N100 152 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 TMEM170AQ8WVE7 144 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 C16orf95Q9H693 158 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 C9orf47Q6ZRZ4 202 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
PTPRE-202ENST00000306042 NDUFAF3Q9BU61 184 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 ZNF292O60281 2723 aa7.03□□□□□ -1.28
PTPRE-202ENST00000306042 EGR2P11161 476 aaPredicted RBP7.02□□□□□ -1.28
PTPRE-202ENST00000306042 NFE4Q86UQ8 179 aa7.02□□□□□ -1.28
PTPRE-202ENST00000306042 IFI27L1Q96BM0 104 aa7.02□□□□□ -1.28
PTPRE-202ENST00000306042 TRBV24-1A0A075B6N3 115 aa7.02□□□□□ -1.29
PTPRE-202ENST00000306042 IGKV1D-37A0A075B6S9 117 aa7.02□□□□□ -1.29
PTPRE-202ENST00000306042 A6NDN8 102 aa7.02□□□□□ -1.29
PTPRE-202ENST00000306042 FAM167A-AS1Q96KT0 104 aa7.02□□□□□ -1.29
PTPRE-202ENST00000306042 FAM104BQ5XKR9 115 aa7.02□□□□□ -1.29
PTPRE-202ENST00000306042 Q8N1Y9 231 aa7.02□□□□□ -1.29
PTPRE-202ENST00000306042 Q9HAA7 133 aa7.02□□□□□ -1.29
PTPRE-202ENST00000306042 SPATA45Q537H7 98 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 TMEM263Q8WUH6 116 aaKnown RBP7.01□□□□□ -1.29
PTPRE-202ENST00000306042 IGKV2D-24A0A075B6R9 120 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 IGHV1-24A0A0C4DH33 117 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 DPM2O94777 84 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 IGLC2P0DOY2 106 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 DNLZQ5SXM8 178 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 ATRAIDQ6UW56 229 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 FAM110AQ9BQ89 295 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 IGHV3-64A0A075B6Q5 118 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 LINC00158P58513 81 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 SLC25A34Q6PIV7 304 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 ATP6V0E2Q8NHE4 81 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 RASL10AQ92737 203 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 TRAV2A0A0B4J234 112 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 LINC01559Q495D7 138 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 ERASQ7Z444 233 aa7.01□□□□□ -1.29
PTPRE-202ENST00000306042 TRAV26-2A0A0B4J265 109 aa7□□□□□ -1.29
PTPRE-202ENST00000306042 H3BMM0 161 aa7□□□□□ -1.29
PTPRE-202ENST00000306042 PCSK5Q92824 1860 aa7□□□□□ -1.29
PTPRE-202ENST00000306042 HHLA3Q9XRX5 114 aa7□□□□□ -1.29
PTPRE-202ENST00000306042 A0A0U1RRA0 63 aa7□□□□□ -1.29
PTPRE-202ENST00000306042 ZFAND3Q9H8U3 227 aa7□□□□□ -1.29
PTPRE-202ENST00000306042 A8MWP6 167 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 TYMSP04818 313 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 UBE2WQ96B02 151 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 PMCHL2Q9BQD1 86 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 TRAV10A0A0B4J240 114 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 Q6ZQT7 251 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 NEGR1Q7Z3B1 354 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 LURAP1LQ8IV03 231 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 TP53TG1Q9Y2A0 90 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 EDA2RQ9HAV5 297 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms