RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 LINC00574Q9H8X3 128 aa8.48□□□□□ -1.05
LSM3-201ENST00000306024 E7EUB6 86 aa8.48□□□□□ -1.05
LSM3-201ENST00000306024 NBR2O15453 112 aa8.48□□□□□ -1.05
LSM3-201ENST00000306024 FCN3O75636 299 aa8.48□□□□□ -1.05
LSM3-201ENST00000306024 S100A4P26447 101 aaKnown RBP8.48□□□□□ -1.05
LSM3-201ENST00000306024 MYCNOSP40205 109 aa8.48□□□□□ -1.05
LSM3-201ENST00000306024 ECSCRQ19T08 205 aa8.48□□□□□ -1.05
LSM3-201ENST00000306024 TMEM75Q8N9X5 138 aa8.48□□□□□ -1.05
LSM3-201ENST00000306024 IGHV1-69DA0A0B4J2H0 117 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 SLC25A20O43772 301 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 IGHV1-69P01742 117 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 CFAP126Q5VTH2 177 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 PSMG3-AS1Q96PY0 264 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 FABP5P3A8MUU1 101 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 OOSP1A8MZH6 123 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 HOXB4P17483 251 aaPredicted RBP8.47□□□□□ -1.05
LSM3-201ENST00000306024 PHLDA1Q8WV24 401 aaPredicted RBP8.47□□□□□ -1.05
LSM3-201ENST00000306024 IGLV1-47P01700 117 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 TMEM219Q86XT9 240 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 MSRB1Q9NZV6 116 aa8.47□□□□□ -1.05
LSM3-201ENST00000306024 IGKV1D-37A0A075B6S9 117 aa8.46□□□□□ -1.05
LSM3-201ENST00000306024 J3KRW8 73 aa8.46□□□□□ -1.05
LSM3-201ENST00000306024 MGPP08493 103 aa8.46□□□□□ -1.05
LSM3-201ENST00000306024 C8orf31Q8N9H6 132 aa8.46□□□□□ -1.05
LSM3-201ENST00000306024 C15orf53Q8NAA6 179 aa8.46□□□□□ -1.05
LSM3-201ENST00000306024 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.05
LSM3-201ENST00000306024 PRADC1Q9BSG0 188 aa8.46□□□□□ -1.05
LSM3-201ENST00000306024 SETD2Q9BYW2 2564 aaPredicted RBP8.46□□□□□ -1.06
LSM3-201ENST00000306024 TRBV19A0A075B6N1 114 aa8.46□□□□□ -1.06
LSM3-201ENST00000306024 CGB1A6NKQ9 187 aa8.46□□□□□ -1.06
LSM3-201ENST00000306024 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.06
LSM3-201ENST00000306024 NFE4Q86UQ8 179 aa8.46□□□□□ -1.06
LSM3-201ENST00000306024 PIP4P2Q8N4L2 257 aa8.46□□□□□ -1.06
LSM3-201ENST00000306024 C10orf126Q8N4M7 172 aa8.46□□□□□ -1.06
LSM3-201ENST00000306024 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.06
LSM3-201ENST00000306024 TRAV2A0A0B4J234 112 aa8.46□□□□□ -1.06
LSM3-201ENST00000306024 CNTFRP26992 372 aa8.46□□□□□ -1.06
LSM3-201ENST00000306024 Q71RC1 249 aaPredicted RBP8.46□□□□□ -1.06
LSM3-201ENST00000306024 WFDC11Q8NEX6 87 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 FAM110AQ9BQ89 295 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 SIRPDQ9H106 197 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 A0A087WX48 190 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 F8VRH5 84 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 H3BUX3 64 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 ZNF493Q6ZR52 646 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 Q8N8P6 123 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 RNF125Q96EQ8 232 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 JMJD1CQ15652 2540 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 LRRC75A-AS1Q8N1F1 130 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 TPSG1Q9NRR2 321 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 HHLA3Q9XRX5 114 aa8.45□□□□□ -1.06
LSM3-201ENST00000306024 CENPVL3A0A0U1RRI6 287 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 IGHV4-38-2P0DP08 117 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
LSM3-201ENST00000306024 IGFL4Q6B9Z1 124 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 SIGLEC9Q9Y336 463 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 IGHV3OR16-8A0A075B7F1 116 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 IGHV3-35A0A0C4DH35 117 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 WI2-2373I1.2A0A1W2PRP0 233 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 PRSS2P07478 247 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 KHDC1LQ5JSQ8 128 aa8.44□□□□□ -1.06
LSM3-201ENST00000306024 EGR2P11161 476 aaPredicted RBP8.43□□□□□ -1.06
LSM3-201ENST00000306024 ASIPP42127 132 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 ZNF56Q15929 161 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 OR10J6PQ8NGY7 276 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 SPANXA1Q9NS26 97 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 TCL1BO95988 128 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 DUX5Q96PT3 197 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 PAX8Q06710 450 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 RNF5Q99942 180 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
LSM3-201ENST00000306024 TRAV4A0A0B4J268 109 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 LYPD1Q8N2G4 141 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 LRBAP50851 2863 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 J3QLI3 93 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 ID1P41134 155 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 IL17RELQ6ZVW7 336 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 TMEM14CQ9P0S9 112 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 COX6CP09669 75 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 C9orf153Q5TBE3 101 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
LSM3-201ENST00000306024 M0R381 172 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 CRIP1P50238 77 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 KLHL30-AS1Q8NEE0 82 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 PRO1854Q9UHT4 67 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 LGALS1P09382 135 aaKnown RBP8.41□□□□□ -1.06
LSM3-201ENST00000306024 ORMDL2Q53FV1 153 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 PIFOQ8TCI5 191 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 RITA1Q96K30 269 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 PRR25Q96S07 402 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 LINC00527Q9UJ94 153 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 RHODO00212 210 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 SIGLEC15Q6ZMC9 328 aa8.41□□□□□ -1.06
LSM3-201ENST00000306024 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
LSM3-201ENST00000306024 MORN3Q6PF18 240 aaPredicted RBP8.4□□□□□ -1.06
LSM3-201ENST00000306024 MOB4Q9Y3A3 225 aa8.4□□□□□ -1.06
LSM3-201ENST00000306024 U3KQK5 164 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms