RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ZNF493Q6ZR52 646 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 PIP4P2Q8N4L2 257 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 TMEM101Q96IK0 257 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 TMEM95Q3KNT9 176 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 TIMM21Q9BVV7 248 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 IGLL5B9A064 214 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 ODF1Q14990 250 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 C10orf126Q8N4M7 172 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 Q8N9W7 124 aa10.3□□□□□ -0.76
DDX54-201ENST00000306014 PHLDA1Q8WV24 401 aaPredicted RBP10.29□□□□□ -0.76
DDX54-201ENST00000306014 CRIP1P50238 77 aa10.29□□□□□ -0.76
DDX54-201ENST00000306014 YAE1D1Q9NRH1 226 aa10.29□□□□□ -0.76
DDX54-201ENST00000306014 PEMTQ9UBM1 199 aa10.29□□□□□ -0.76
DDX54-201ENST00000306014 TRGV2A0A075B6R0 118 aa10.28□□□□□ -0.76
DDX54-201ENST00000306014 CENPVL3A0A0U1RRI6 287 aa10.28□□□□□ -0.76
DDX54-201ENST00000306014 B4DSR2 109 aa10.28□□□□□ -0.76
DDX54-201ENST00000306014 DEFB1P60022 68 aa10.28□□□□□ -0.76
DDX54-201ENST00000306014 WFDC2Q14508 124 aa10.28□□□□□ -0.76
DDX54-201ENST00000306014 C2orf82Q6UX34 121 aa10.28□□□□□ -0.76
DDX54-201ENST00000306014 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
DDX54-201ENST00000306014 TMEM141Q96I45 108 aa10.28□□□□□ -0.76
DDX54-201ENST00000306014 ATXN8Q156A1 80 aa10.27□□□□□ -0.76
DDX54-201ENST00000306014 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.76
DDX54-201ENST00000306014 STHQ8IWL8 128 aa10.27□□□□□ -0.77
DDX54-201ENST00000306014 LY6G5BQ8NDX9 201 aa10.27□□□□□ -0.77
DDX54-201ENST00000306014 TRBV20-1A0A075B6N2 111 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 TRBV7-9A0A0J9YWB2 115 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 CCDC168Q8NDH2 2452 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 J3QQQ9 107 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 IGLV2-11P01706 119 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 DEFB131AP59861 70 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 Q8NA96 180 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 PRO1854Q9UHT4 67 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 RBX1P62877 108 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 PPDPFLQ8WWR9 84 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 MRPL53Q96EL3 112 aaKnown RBP10.26□□□□□ -0.77
DDX54-201ENST00000306014 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
DDX54-201ENST00000306014 MYO9AB2RTY4 2548 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 CRYGBP07316 175 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 SCGB1A1P11684 91 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 HIGD1BQ9P298 99 aa10.26□□□□□ -0.77
DDX54-201ENST00000306014 ZFP36P26651 326 aaKnown RBP10.25□□□□□ -0.77
DDX54-201ENST00000306014 LENEPQ9Y5L5 61 aa10.25□□□□□ -0.77
DDX54-201ENST00000306014 IGHV7-4-1A0A0J9YVY3 117 aa10.25□□□□□ -0.77
DDX54-201ENST00000306014 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
DDX54-201ENST00000306014 FGF6P10767 208 aa10.25□□□□□ -0.77
DDX54-201ENST00000306014 IGHV1OR15-1A0A075B7D0 117 aa10.25□□□□□ -0.77
DDX54-201ENST00000306014 PRB1P04280 392 aa10.25□□□□□ -0.77
DDX54-201ENST00000306014 MSMBP08118 114 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 TRAV8-3A0A0A6YYJ7 113 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 ADARB2-AS1A8MUL3 147 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 ZNF415Q09FC8 603 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 TRGV1A0A0A0MS02 117 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 I3L3M4 83 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 J3QKU1 62 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 MAPK1IP1LQ8NDC0 245 aa10.24□□□□□ -0.77
DDX54-201ENST00000306014 UBE2E2Q96LR5 201 aa10.23□□□□□ -0.77
DDX54-201ENST00000306014 RNASE13Q5GAN3 156 aaKnown RBP10.23□□□□□ -0.77
DDX54-201ENST00000306014 TRANK1O15050 2925 aa10.23□□□□□ -0.77
DDX54-201ENST00000306014 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
DDX54-201ENST00000306014 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
DDX54-201ENST00000306014 MORN3Q6PF18 240 aaPredicted RBP10.22□□□□□ -0.77
DDX54-201ENST00000306014 TET2Q6N021 2002 aaPredicted RBP10.22□□□□□ -0.77
DDX54-201ENST00000306014 DSCR9P59020 149 aa10.22□□□□□ -0.77
DDX54-201ENST00000306014 ZNF48Q96MX3 618 aaPredicted RBP10.22□□□□□ -0.77
DDX54-201ENST00000306014 IGKV2D-26A0A0A0MRZ7 120 aa10.21□□□□□ -0.77
DDX54-201ENST00000306014 G3V4G9 280 aa10.21□□□□□ -0.77
DDX54-201ENST00000306014 BLCAPP62952 87 aa10.21□□□□□ -0.77
DDX54-201ENST00000306014 IGHV3-38A0A0C4DH36 116 aa10.21□□□□□ -0.77
DDX54-201ENST00000306014 C16orf54Q6UWD8 224 aa10.21□□□□□ -0.77
DDX54-201ENST00000306014 C9orf47Q6ZRZ4 202 aa10.21□□□□□ -0.77
DDX54-201ENST00000306014 ATP6V0BQ99437 205 aa10.21□□□□□ -0.77
DDX54-201ENST00000306014 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.78
DDX54-201ENST00000306014 SLC25A20O43772 301 aa10.21□□□□□ -0.78
DDX54-201ENST00000306014 C2orf91Q6ZV80 131 aa10.21□□□□□ -0.78
DDX54-201ENST00000306014 NAV2Q8IVL1 2488 aa10.2□□□□□ -0.78
DDX54-201ENST00000306014 LINC01548A6NM66 108 aa10.2□□□□□ -0.78
DDX54-201ENST00000306014 RPL36AP83881 106 aaKnown RBP10.2□□□□□ -0.78
DDX54-201ENST00000306014 RPL36ALQ969Q0 106 aaKnown RBP10.2□□□□□ -0.78
DDX54-201ENST00000306014 NDUFA12Q9UI09 145 aa10.2□□□□□ -0.78
DDX54-201ENST00000306014 PRIMA1Q86XR5 153 aa10.2□□□□□ -0.78
DDX54-201ENST00000306014 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
DDX54-201ENST00000306014 SUMO4Q6EEV6 95 aa10.2□□□□□ -0.78
DDX54-201ENST00000306014 ZFP2Q6ZN57 461 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 ZFYVE26Q68DK2 2539 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 UNQ9165/PRO28630Q6UXU0 137 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 Q71RC1 249 aaPredicted RBP10.19□□□□□ -0.78
DDX54-201ENST00000306014 C5orf56Q8N8D9 126 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 BAALCQ8WXS3 180 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 LINC00158P58513 81 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 PRORYQ9H606 182 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 TCTEX1D4Q5JR98 221 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 AJUBAQ96IF1 538 aa10.19□□□□□ -0.78
DDX54-201ENST00000306014 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms