RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 TSPAN13O95857 204 aa10.07□□□□□ -0.8
TRIM35-201ENST00000305364 PHLDA1Q8WV24 401 aaPredicted RBP10.07□□□□□ -0.8
TRIM35-201ENST00000305364 CCL19Q99731 98 aa10.07□□□□□ -0.8
TRIM35-201ENST00000305364 NAV2Q8IVL1 2488 aa10.07□□□□□ -0.8
TRIM35-201ENST00000305364 DSPP15924 2871 aaKnown RBP10.07□□□□□ -0.8
TRIM35-201ENST00000305364 ANKRD29Q8N6D5 301 aa10.07□□□□□ -0.8
TRIM35-201ENST00000305364 PCSK5Q92824 1860 aa10.06□□□□□ -0.8
TRIM35-201ENST00000305364 A0A087WWL8 130 aa10.06□□□□□ -0.8
TRIM35-201ENST00000305364 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
TRIM35-201ENST00000305364 NTN5Q8WTR8 489 aaPredicted RBP10.06□□□□□ -0.8
TRIM35-201ENST00000305364 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
TRIM35-201ENST00000305364 ZMAT4Q9H898 229 aa10.06□□□□□ -0.8
TRIM35-201ENST00000305364 RAI1Q7Z5J4 1906 aaPredicted RBP10.06□□□□□ -0.8
TRIM35-201ENST00000305364 XGP55808 180 aa10.06□□□□□ -0.8
TRIM35-201ENST00000305364 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
TRIM35-201ENST00000305364 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
TRIM35-201ENST00000305364 DUSP14O95147 198 aaKnown RBP10.05□□□□□ -0.8
TRIM35-201ENST00000305364 CD7P09564 240 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 PMVKQ15126 192 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 MRGPRG-AS1Q2M3A8 158 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 IGFL2Q6UWQ7 119 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 BAALCQ8WXS3 180 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 G3V318 75 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 TCL1BO95988 128 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 TCF15Q12870 199 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 WNK1Q9H4A3 2382 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 IGHV3-11P01762 117 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 NPC2P61916 151 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 CFAP126Q5VTH2 177 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 POLQO75417 2590 aa10.05□□□□□ -0.8
TRIM35-201ENST00000305364 MRPS12O15235 138 aaKnown RBP10.04□□□□□ -0.8
TRIM35-201ENST00000305364 SRD5A1P18405 259 aa10.04□□□□□ -0.8
TRIM35-201ENST00000305364 PIP4P1Q86T03 277 aa10.04□□□□□ -0.8
TRIM35-201ENST00000305364 IGHV3OR16-10A0A075B7F0 116 aa10.04□□□□□ -0.8
TRIM35-201ENST00000305364 BUB3O43684 328 aa10.04□□□□□ -0.8
TRIM35-201ENST00000305364 LY6EQ16553 131 aa10.04□□□□□ -0.8
TRIM35-201ENST00000305364 THBDP07204 575 aa10.04□□□□□ -0.8
TRIM35-201ENST00000305364 PAX8Q06710 450 aa10.04□□□□□ -0.8
TRIM35-201ENST00000305364 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
TRIM35-201ENST00000305364 K7ENP7 123 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 FCN3O75636 299 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 ATXN8Q156A1 80 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 C10orf126Q8N4M7 172 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 GAGE12JA6NER3 117 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 J3QQQ9 107 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 VCYO14598 125 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 ATP6V0E1O15342 81 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 GAGE7O76087 117 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 GAGE12FP0CL80 117 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 GAGE12GP0CL81 117 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 GAGE12IP0CL82 117 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 GAGE4Q13068 117 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 SMAD5-AS1Q9Y6J3 95 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 C9orf139Q6ZV77 190 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 TOMM6Q96B49 74 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 LINC00477Q96M19 166 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 FREM2Q5SZK8 3169 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 C11orf86A6NJI1 115 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 IGFL3Q6UXB1 125 aa10.03□□□□□ -0.8
TRIM35-201ENST00000305364 RBAKDNA6NC62 111 aa10.02□□□□□ -0.81
TRIM35-201ENST00000305364 IFITM1P13164 125 aa10.02□□□□□ -0.81
TRIM35-201ENST00000305364 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
TRIM35-201ENST00000305364 C11orf21Q9P2W6 132 aa10.02□□□□□ -0.81
TRIM35-201ENST00000305364 GNRH2O43555 120 aa10.02□□□□□ -0.81
TRIM35-201ENST00000305364 NBL1P41271 181 aa10.02□□□□□ -0.81
TRIM35-201ENST00000305364 MORN3Q6PF18 240 aaPredicted RBP10.02□□□□□ -0.81
TRIM35-201ENST00000305364 NRACQ8N912 160 aa10.02□□□□□ -0.81
TRIM35-201ENST00000305364 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.01□□□□□ -0.81
TRIM35-201ENST00000305364 A4D1N5 150 aa10.01□□□□□ -0.81
TRIM35-201ENST00000305364 TRPT1Q86TN4 253 aaKnown RBP10.01□□□□□ -0.81
TRIM35-201ENST00000305364 OVOL1O14753 267 aa10.01□□□□□ -0.81
TRIM35-201ENST00000305364 SRSF2Q01130 221 aaKnown RBP10.01□□□□□ -0.81
TRIM35-201ENST00000305364 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
TRIM35-201ENST00000305364 SMIM20Q8N5G0 67 aa10.01□□□□□ -0.81
TRIM35-201ENST00000305364 SDHAF1A6NFY7 115 aa10.01□□□□□ -0.81
TRIM35-201ENST00000305364 CFC1BP0CG36 223 aa10.01□□□□□ -0.81
TRIM35-201ENST00000305364 CFC1P0CG37 223 aa10.01□□□□□ -0.81
TRIM35-201ENST00000305364 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
TRIM35-201ENST00000305364 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
TRIM35-201ENST00000305364 DEFB1P60022 68 aa10□□□□□ -0.81
TRIM35-201ENST00000305364 TMEM219Q86XT9 240 aa10□□□□□ -0.81
TRIM35-201ENST00000305364 NPBQ8NG41 125 aa10□□□□□ -0.81
TRIM35-201ENST00000305364 NFE4Q86UQ8 179 aa10□□□□□ -0.81
TRIM35-201ENST00000305364 C15orf53Q8NAA6 179 aa10□□□□□ -0.81
TRIM35-201ENST00000305364 SPXQ9BT56 116 aa10□□□□□ -0.81
TRIM35-201ENST00000305364 ID1P41134 155 aa10□□□□□ -0.81
TRIM35-201ENST00000305364 FAM110DQ8TAY7 271 aaPredicted RBP10□□□□□ -0.81
TRIM35-201ENST00000305364 DYNLRB2Q8TF09 96 aa10□□□□□ -0.81
TRIM35-201ENST00000305364 F6UB75 175 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 Q6ZQT7 251 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 CNFNQ9BYD5 112 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 H3BMM0 161 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 USP9XQ93008 2570 aaPredicted RBP9.99□□□□□ -0.81
TRIM35-201ENST00000305364 IGHV7-81A0A0B4J1V7 117 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 TRAV12-3A0A0B4J271 114 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 M0R1W7 72 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms