RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 IGHV3-53P01767 116 aa12.59□□□□□ -0.39
TMEM88-201ENST00000301599 S100A6P06703 90 aa12.59□□□□□ -0.39
TMEM88-201ENST00000301599 RAB5AP20339 215 aa12.59□□□□□ -0.39
TMEM88-201ENST00000301599 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
TMEM88-201ENST00000301599 ICOSQ9Y6W8 199 aa12.59□□□□□ -0.39
TMEM88-201ENST00000301599 TRGV11A0A075B6L2 103 aa12.58□□□□□ -0.4
TMEM88-201ENST00000301599 ZNF727A8MUV8 499 aa12.58□□□□□ -0.4
TMEM88-201ENST00000301599 BTF3P20290 206 aaKnown RBP12.58□□□□□ -0.4
TMEM88-201ENST00000301599 CEBPGP53567 150 aa12.58□□□□□ -0.4
TMEM88-201ENST00000301599 FHL2Q14192 279 aa12.58□□□□□ -0.4
TMEM88-201ENST00000301599 TMEM241Q24JQ0 296 aa12.58□□□□□ -0.4
TMEM88-201ENST00000301599 ZNF575Q86XF7 245 aa12.58□□□□□ -0.4
TMEM88-201ENST00000301599 RPH3ALQ9UNE2 315 aa12.58□□□□□ -0.4
TMEM88-201ENST00000301599 DYNC1H1Q14204 4646 aaKnown RBP12.58□□□□□ -0.4
TMEM88-201ENST00000301599 CRYBA4P53673 196 aa12.57□□□□□ -0.4
TMEM88-201ENST00000301599 TMEM183BQ1AE95 376 aa12.57□□□□□ -0.4
TMEM88-201ENST00000301599 GOLT1AQ6ZVE7 132 aa12.57□□□□□ -0.4
TMEM88-201ENST00000301599 TMEM183AQ8IXX5 376 aa12.57□□□□□ -0.4
TMEM88-201ENST00000301599 SMIM7Q9BQ49 75 aa12.57□□□□□ -0.4
TMEM88-201ENST00000301599 SDF2L1Q9HCN8 221 aa12.57□□□□□ -0.4
TMEM88-201ENST00000301599 MUC4Q99102 2169 aa12.57□□□□□ -0.4
TMEM88-201ENST00000301599 HMGB3O15347 200 aaKnown RBP12.56□□□□□ -0.4
TMEM88-201ENST00000301599 FGF8P55075 233 aaPredicted RBP12.56□□□□□ -0.4
TMEM88-201ENST00000301599 MRPL23Q16540 153 aaKnown RBP12.56□□□□□ -0.4
TMEM88-201ENST00000301599 TDRG1Q3Y452 100 aa12.56□□□□□ -0.4
TMEM88-201ENST00000301599 IQCF2Q8IXL9 164 aa12.56□□□□□ -0.4
TMEM88-201ENST00000301599 RASL10AQ92737 203 aa12.56□□□□□ -0.4
TMEM88-201ENST00000301599 ANAPC16Q96DE5 110 aa12.56□□□□□ -0.4
TMEM88-201ENST00000301599 C8orf49Q96NF6 230 aa12.56□□□□□ -0.4
TMEM88-201ENST00000301599 TCEAL7Q9BRU2 100 aa12.56□□□□□ -0.4
TMEM88-201ENST00000301599 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
TMEM88-201ENST00000301599 TRGV4A0A0C4DH28 118 aa12.55□□□□□ -0.4
TMEM88-201ENST00000301599 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
TMEM88-201ENST00000301599 SIVA1O15304 175 aa12.55□□□□□ -0.4
TMEM88-201ENST00000301599 STAG3L2P0CL84 134 aa12.55□□□□□ -0.4
TMEM88-201ENST00000301599 STAG3L3P0CL85 134 aa12.55□□□□□ -0.4
TMEM88-201ENST00000301599 S100PP25815 95 aa12.55□□□□□ -0.4
TMEM88-201ENST00000301599 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
TMEM88-201ENST00000301599 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
TMEM88-201ENST00000301599 GNRH2O43555 120 aa12.54□□□□□ -0.4
TMEM88-201ENST00000301599 ARL14EPLP0DKL9 152 aa12.54□□□□□ -0.4
TMEM88-201ENST00000301599 TMEM167BQ9NRX6 74 aa12.54□□□□□ -0.4
TMEM88-201ENST00000301599 NAGKQ9UJ70 344 aa12.54□□□□□ -0.4
TMEM88-201ENST00000301599 SERTM2A0A1B0GWG4 89 aa12.53□□□□□ -0.4
TMEM88-201ENST00000301599 S100A8P05109 93 aa12.53□□□□□ -0.4
TMEM88-201ENST00000301599 LYPD5Q6UWN5 251 aa12.53□□□□□ -0.4
TMEM88-201ENST00000301599 KCNS1Q96KK3 526 aa12.53□□□□□ -0.4
TMEM88-201ENST00000301599 TRAV8-1A0A0A6YYK1 113 aa12.52□□□□□ -0.41
TMEM88-201ENST00000301599 K7EQM0 130 aa12.52□□□□□ -0.41
TMEM88-201ENST00000301599 NXPH4O95158 308 aa12.52□□□□□ -0.41
TMEM88-201ENST00000301599 GNG5P63218 68 aa12.52□□□□□ -0.41
TMEM88-201ENST00000301599 SMUG1Q53HV7 270 aa12.52□□□□□ -0.41
TMEM88-201ENST00000301599 NEGR1Q7Z3B1 354 aa12.52□□□□□ -0.41
TMEM88-201ENST00000301599 ZNF479Q96JC4 524 aa12.52□□□□□ -0.41
TMEM88-201ENST00000301599 NDFIP1Q9BT67 221 aa12.52□□□□□ -0.41
TMEM88-201ENST00000301599 IGHV3-16A0A0C4DH30 117 aa12.51□□□□□ -0.41
TMEM88-201ENST00000301599 M0R2P5 195 aa12.51□□□□□ -0.41
TMEM88-201ENST00000301599 PAGE4O60829 102 aa12.51□□□□□ -0.41
TMEM88-201ENST00000301599 GCHFRP30047 84 aa12.51□□□□□ -0.41
TMEM88-201ENST00000301599 AKR1C3P42330 323 aa12.51□□□□□ -0.41
TMEM88-201ENST00000301599 C5orf17Q8NAS9 161 aa12.51□□□□□ -0.41
TMEM88-201ENST00000301599 YPEL4Q96NS1 127 aa12.51□□□□□ -0.41
TMEM88-201ENST00000301599 TRBV24-1A0A075B6N3 115 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 TRAV4A0A0B4J268 109 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 ORM1P02763 201 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 TCRAP04437 139 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 SUMO1P63165 101 aaKnown RBP12.5□□□□□ -0.41
TMEM88-201ENST00000301599 KCNIP4Q6PIL6 250 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 OR4C5Q8NGB2 326 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 ISOC2Q96AB3 205 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 SGK494Q96LW2 274 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 IMMP2LQ96T52 175 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 PARLQ9H300 379 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 LY96Q9Y6Y9 160 aa12.5□□□□□ -0.41
TMEM88-201ENST00000301599 K7EQD1 137 aa12.49□□□□□ -0.41
TMEM88-201ENST00000301599 SRIP30626 198 aa12.49□□□□□ -0.41
TMEM88-201ENST00000301599 RPS10P46783 165 aaKnown RBP12.49□□□□□ -0.41
TMEM88-201ENST00000301599 ELOBQ15370 118 aa12.49□□□□□ -0.41
TMEM88-201ENST00000301599 EPDR1Q9UM22 224 aa12.49□□□□□ -0.41
TMEM88-201ENST00000301599 TRAV9-2A0A087WT02 112 aa12.48□□□□□ -0.41
TMEM88-201ENST00000301599 TYMSP04818 313 aa12.48□□□□□ -0.41
TMEM88-201ENST00000301599 S100A9P06702 114 aaKnown RBP12.48□□□□□ -0.41
TMEM88-201ENST00000301599 GYPEP15421 78 aa12.48□□□□□ -0.41
TMEM88-201ENST00000301599 RPL19P84098 196 aaKnown RBP12.48□□□□□ -0.41
TMEM88-201ENST00000301599 ADIRFQ15847 76 aa12.48□□□□□ -0.41
TMEM88-201ENST00000301599 CST9LP1Q5W188 147 aa12.48□□□□□ -0.41
TMEM88-201ENST00000301599 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
TMEM88-201ENST00000301599 PSG8Q9UQ74 426 aa12.48□□□□□ -0.41
TMEM88-201ENST00000301599 FBLL1A6NHQ2 334 aaKnown RBP12.47□□□□□ -0.41
TMEM88-201ENST00000301599 LINC00315P59091 139 aa12.47□□□□□ -0.41
TMEM88-201ENST00000301599 ZNF674Q2M3X9 581 aa12.47□□□□□ -0.41
TMEM88-201ENST00000301599 C5orf52A6NGY3 159 aa12.46□□□□□ -0.41
TMEM88-201ENST00000301599 C9JCJ5 164 aa12.46□□□□□ -0.41
TMEM88-201ENST00000301599 CDK2AP2O75956 126 aa12.46□□□□□ -0.41
TMEM88-201ENST00000301599 RPL23P62829 140 aaKnown RBP12.46□□□□□ -0.41
TMEM88-201ENST00000301599 TRAV9-1A0A075B6T8 112 aa12.45□□□□□ -0.42
TMEM88-201ENST00000301599 A0A1W2PRE2 83 aa12.45□□□□□ -0.42
TMEM88-201ENST00000301599 GCGP01275 180 aa12.45□□□□□ -0.42
TMEM88-201ENST00000301599 ZNF80P51504 273 aaPredicted RBP12.45□□□□□ -0.42
TMEM88-201ENST00000301599 SAPCD1Q5SSQ6 148 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms