RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PIFOQ8TCI5 191 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 BAALCQ8WXS3 180 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 LYNX1G3V0Z9 82 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 LYNX1P0DP58 116 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 CCL11P51671 97 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 DLX6P56179 175 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 EDA2RQ9HAV5 297 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 I3L2K1 104 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 ZNF474Q6S9Z5 364 aaPredicted RBP11.07□□□□□ -0.64
CDT1-201ENST00000301019 GFRALQ6UXV0 394 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 NRACQ8N912 160 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 VCX2Q9H322 139 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 TMEM14CQ9P0S9 112 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 TRGV11A0A075B6L2 103 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 A0A0J9YY99 117 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 TEX22C9J3V5 150 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 K7EIM0 57 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 CLEC2BQ92478 149 aa11.07□□□□□ -0.64
CDT1-201ENST00000301019 LYRM7Q5U5X0 104 aa11.06□□□□□ -0.64
CDT1-201ENST00000301019 C2orf82Q6UX34 121 aa11.05□□□□□ -0.64
CDT1-201ENST00000301019 TRAV41A0A0B4J266 112 aa11.05□□□□□ -0.64
CDT1-201ENST00000301019 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
CDT1-201ENST00000301019 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
CDT1-201ENST00000301019 FAM27E3Q08E93 113 aa11.05□□□□□ -0.64
CDT1-201ENST00000301019 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
CDT1-201ENST00000301019 LINC00527Q9UJ94 153 aa11.05□□□□□ -0.64
CDT1-201ENST00000301019 K7EM74 188 aa11.04□□□□□ -0.64
CDT1-201ENST00000301019 CSMD2Q7Z408 3487 aa11.04□□□□□ -0.64
CDT1-201ENST00000301019 EIF4EBP3O60516 100 aaPredicted RBP11.04□□□□□ -0.64
CDT1-201ENST00000301019 SMIM2Q9BVW6 85 aa11.04□□□□□ -0.64
CDT1-201ENST00000301019 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 PMVKQ15126 192 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 CSDC2Q9Y534 153 aaKnown RBP11.03□□□□□ -0.64
CDT1-201ENST00000301019 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 INS-IGF2F8WCM5 200 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 NDPQ00604 133 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 MUSTN1Q8IVN3 82 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 NEXN-AS1Q8NBZ9 246 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 NDUFB3O43676 98 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 PF4V1P10720 104 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 LINC01620Q4KN68 170 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 OR10J6PQ8NGY7 276 aa11.03□□□□□ -0.64
CDT1-201ENST00000301019 RBAKDNA6NC62 111 aa11.02□□□□□ -0.64
CDT1-201ENST00000301019 H3BMM0 161 aa11.02□□□□□ -0.64
CDT1-201ENST00000301019 IGHV3-30P01768 117 aa11.02□□□□□ -0.64
CDT1-201ENST00000301019 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.64
CDT1-201ENST00000301019 UBE2WQ96B02 151 aa11.02□□□□□ -0.64
CDT1-201ENST00000301019 F5H697 171 aa11.02□□□□□ -0.65
CDT1-201ENST00000301019 TP53TG1Q9Y2A0 90 aa11.02□□□□□ -0.65
CDT1-201ENST00000301019 SMAD5-AS1Q9Y6J3 95 aa11.02□□□□□ -0.65
CDT1-201ENST00000301019 IGHG4P01861 327 aa11.01□□□□□ -0.65
CDT1-201ENST00000301019 SUMO2P61956 95 aaKnown RBP11.01□□□□□ -0.65
CDT1-201ENST00000301019 JPT2Q9H910 190 aa11.01□□□□□ -0.65
CDT1-201ENST00000301019 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
CDT1-201ENST00000301019 TIMD4Q96H15 378 aa11.01□□□□□ -0.65
CDT1-201ENST00000301019 ZNF256Q9Y2P7 627 aaPredicted RBP11.01□□□□□ -0.65
CDT1-201ENST00000301019 TIMM23O14925 209 aa11.01□□□□□ -0.65
CDT1-201ENST00000301019 DAND5Q8N907 189 aa11.01□□□□□ -0.65
CDT1-201ENST00000301019 AGPAT4-IT1Q9H0P7 198 aa11.01□□□□□ -0.65
CDT1-201ENST00000301019 NSUN5P1Q3KNT7 163 aa11□□□□□ -0.65
CDT1-201ENST00000301019 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
CDT1-201ENST00000301019 FAM74A4Q5TZK3 123 aa11□□□□□ -0.65
CDT1-201ENST00000301019 RAB1BQ9H0U4 201 aa11□□□□□ -0.65
CDT1-201ENST00000301019 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
CDT1-201ENST00000301019 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 MDS2Q8NDY4 140 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 A0A087WWL8 130 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 CEACAM4O75871 244 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 FDCSPQ8NFU4 85 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 A8MZ25 164 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 TRIAP1O43715 76 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 IGHV1-8P0DP01 117 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 COX6B1P14854 86 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 DEFB109BQ30KR1 87 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 LINC01587Q99440 93 aa10.99□□□□□ -0.65
CDT1-201ENST00000301019 ASIPP42127 132 aa10.98□□□□□ -0.65
CDT1-201ENST00000301019 IGLV1-44P01699 117 aa10.98□□□□□ -0.65
CDT1-201ENST00000301019 CRYGDP07320 174 aa10.98□□□□□ -0.65
CDT1-201ENST00000301019 FAM19A5Q7Z5A7 132 aaPredicted RBP10.98□□□□□ -0.65
CDT1-201ENST00000301019 HERVK_113P63121 156 aa10.97□□□□□ -0.65
CDT1-201ENST00000301019 PSMG4Q5JS54 123 aa10.97□□□□□ -0.65
CDT1-201ENST00000301019 LYPD1Q8N2G4 141 aa10.97□□□□□ -0.65
CDT1-201ENST00000301019 J3QQQ9 107 aa10.97□□□□□ -0.65
CDT1-201ENST00000301019 ZNRF2Q8NHG8 242 aa10.97□□□□□ -0.65
CDT1-201ENST00000301019 PRR9Q5T870 116 aa10.97□□□□□ -0.65
CDT1-201ENST00000301019 PHLDA3Q9Y5J5 127 aa10.97□□□□□ -0.65
CDT1-201ENST00000301019 IGHV7-4-1A0A0J9YVY3 117 aa10.96□□□□□ -0.65
CDT1-201ENST00000301019 CD3EP07766 207 aa10.96□□□□□ -0.65
CDT1-201ENST00000301019 RPL11P62913 178 aaKnown RBP10.96□□□□□ -0.65
CDT1-201ENST00000301019 ATXN8Q156A1 80 aa10.96□□□□□ -0.65
CDT1-201ENST00000301019 NPFFO15130 113 aa10.96□□□□□ -0.66
CDT1-201ENST00000301019 GNRH2O43555 120 aa10.96□□□□□ -0.66
CDT1-201ENST00000301019 TOMM6Q96B49 74 aa10.96□□□□□ -0.66
CDT1-201ENST00000301019 LINC00477Q96M19 166 aa10.96□□□□□ -0.66
CDT1-201ENST00000301019 LY6HO94772 140 aa10.96□□□□□ -0.66
CDT1-201ENST00000301019 LOXP28300 417 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms