RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PRAC2D3DTV9 90 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 DEFB113Q30KQ7 82 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 CAMK2N2Q96S95 79 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 RBAKDNA6NC62 111 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 CFC1BP0CG36 223 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 CFC1P0CG37 223 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 C1orf43Q9BWL3 253 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 IGLV3-1P01715 115 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 MUSTN1Q8IVN3 82 aa10.55□□□□□ -0.72
CHRFAM7A-201ENST00000299847 C11orf52Q96A22 123 aa10.55□□□□□ -0.72
CHRFAM7A-201ENST00000299847 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
CHRFAM7A-201ENST00000299847 TIRAPP58753 221 aa10.55□□□□□ -0.72
CHRFAM7A-201ENST00000299847 SS18L2Q9UHA2 77 aa10.55□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ETDCA0A1B0GVM5 59 aa10.54□□□□□ -0.72
CHRFAM7A-201ENST00000299847 RBM3P98179 157 aaKnown RBP10.54□□□□□ -0.72
CHRFAM7A-201ENST00000299847 I3L2K1 104 aa10.54□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
CHRFAM7A-201ENST00000299847 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ZNF407Q9C0G0 2248 aa10.54□□□□□ -0.72
CHRFAM7A-201ENST00000299847 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
CHRFAM7A-201ENST00000299847 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
CHRFAM7A-201ENST00000299847 A0A0J9YXV3 536 aa10.53□□□□□ -0.72
CHRFAM7A-201ENST00000299847 PLA2G5P39877 138 aa10.53□□□□□ -0.72
CHRFAM7A-201ENST00000299847 TDRG1Q3Y452 100 aa10.53□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ZNF503Q96F45 646 aa10.53□□□□□ -0.72
CHRFAM7A-201ENST00000299847 USF3Q68DE3 2245 aa10.53□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ATP6V0E2Q8NHE4 81 aa10.53□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ICOSQ9Y6W8 199 aa10.53□□□□□ -0.72
CHRFAM7A-201ENST00000299847 K7EIM0 57 aa10.52□□□□□ -0.72
CHRFAM7A-201ENST00000299847 C9orf66Q5T8R8 295 aa10.52□□□□□ -0.73
CHRFAM7A-201ENST00000299847 PIP4P1Q86T03 277 aa10.52□□□□□ -0.73
CHRFAM7A-201ENST00000299847 Q8N1Y9 231 aa10.52□□□□□ -0.73
CHRFAM7A-201ENST00000299847 H3BUA1 57 aa10.52□□□□□ -0.73
CHRFAM7A-201ENST00000299847 PATE2Q6UY27 113 aa10.52□□□□□ -0.73
CHRFAM7A-201ENST00000299847 C16orf74Q96GX8 76 aa10.52□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SPTBN1Q01082 2364 aaKnown RBP10.51□□□□□ -0.73
CHRFAM7A-201ENST00000299847 DEFB135Q30KP9 77 aa10.51□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SND1-IT1Q9HBX3 110 aa10.51□□□□□ -0.73
CHRFAM7A-201ENST00000299847 NCKAP5O14513 1909 aa10.51□□□□□ -0.73
CHRFAM7A-201ENST00000299847 DYSFO75923 2080 aa10.51□□□□□ -0.73
CHRFAM7A-201ENST00000299847 ZFP36P26651 326 aaKnown RBP10.51□□□□□ -0.73
CHRFAM7A-201ENST00000299847 COX7A2LO14548 114 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 HIST2H2BDQ6DRA6 164 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 TRBV12-3P01733 135 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 IGHG2P01859 326 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SPTBN2O15020 2390 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 CTSGP08311 255 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 C5orf56Q8N8D9 126 aa10.5□□□□□ -0.73
CHRFAM7A-201ENST00000299847 E7EUB6 86 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 ADORA2A-AS1P86434 159 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 WISP2O76076 250 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 IGLV11-55A0A075B6I3 123 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SIVA1O15304 175 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SRSF2Q01130 221 aaKnown RBP10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SEM1Q6ZVN7 128 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 GTSF1Q8WW33 167 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SPATA25Q9BR10 227 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 PRSS47A8MTI9 375 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 CLEC2BQ92478 149 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 ANAPC1Q9H1A4 1944 aa10.49□□□□□ -0.73
CHRFAM7A-201ENST00000299847 B5MCH6 92 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 A4D1N5 150 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 Q8N9W7 124 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 EML6Q6ZMW3 1958 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 FRMD6-AS1P0C7T7 363 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 HHLA3Q9XRX5 114 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 IGLL5B9A064 214 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 CHKB-CPT1BH3BT56 60 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 WFDC9Q8NEX5 89 aa10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 KIF26AQ9ULI4 1882 aaPredicted RBP10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 TNRC6BQ9UPQ9 1833 aaKnown RBP10.48□□□□□ -0.73
CHRFAM7A-201ENST00000299847 C9orf47Q6ZRZ4 202 aa10.47□□□□□ -0.73
CHRFAM7A-201ENST00000299847 BAALCQ8WXS3 180 aa10.47□□□□□ -0.73
CHRFAM7A-201ENST00000299847 CCL18P55774 89 aa10.47□□□□□ -0.73
CHRFAM7A-201ENST00000299847 ATP5G1P05496 136 aa10.47□□□□□ -0.73
CHRFAM7A-201ENST00000299847 CEMP1Q6PRD7 247 aaPredicted RBP10.47□□□□□ -0.73
CHRFAM7A-201ENST00000299847 SPANXA1Q9NS26 97 aa10.47□□□□□ -0.73
CHRFAM7A-201ENST00000299847 IGKV1-17P01599 117 aa10.46□□□□□ -0.73
CHRFAM7A-201ENST00000299847 UBE2AP49459 152 aa10.46□□□□□ -0.73
CHRFAM7A-201ENST00000299847 IL15RAQ13261 267 aa10.46□□□□□ -0.73
CHRFAM7A-201ENST00000299847 MRPL23Q16540 153 aaKnown RBP10.46□□□□□ -0.73
CHRFAM7A-201ENST00000299847 EP300Q09472 2414 aaPredicted RBP10.46□□□□□ -0.73
CHRFAM7A-201ENST00000299847 C2orf70A6NJV1 201 aa10.46□□□□□ -0.73
CHRFAM7A-201ENST00000299847 HERV-K104P63124 156 aa10.46□□□□□ -0.73
CHRFAM7A-201ENST00000299847 DOPEY2Q9Y3R5 2298 aa10.46□□□□□ -0.73
CHRFAM7A-201ENST00000299847 PKDREJQ9NTG1 2253 aa10.46□□□□□ -0.74
CHRFAM7A-201ENST00000299847 CACNA1BQ00975 2339 aa10.46□□□□□ -0.74
CHRFAM7A-201ENST00000299847 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.74
CHRFAM7A-201ENST00000299847 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 C8orf31Q8N9H6 132 aa10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 MRPL36Q9P0J6 103 aaKnown RBP10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 GVINP1Q7Z2Y8 2422 aa10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 TANC1Q9C0D5 1861 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms