RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 FAM110DQ8TAY7 271 aaPredicted RBP4.42□□□□□ -1.7
CPSF2-201ENST00000298875 TNRC6BQ9UPQ9 1833 aaKnown RBP4.42□□□□□ -1.7
CPSF2-201ENST00000298875 FER1L5A0AVI2 2057 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 IGHV4-28A0A0C4DH34 117 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 B3GALT5-AS1P59052 145 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 PLXNA4Q9HCM2 1894 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 TANC2Q9HCD6 1990 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 UBE2E1P51965 193 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 DAND5Q8N907 189 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 EML6Q6ZMW3 1958 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 RBAKDNA6NC62 111 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 PROP1O75360 226 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 CRYGBP07316 175 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 RNASE8Q8TDE3 154 aaKnown RBP4.42□□□□□ -1.7
CPSF2-201ENST00000298875 TANC1Q9C0D5 1861 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 RIF1Q5UIP0 2472 aaKnown RBP4.42□□□□□ -1.7
CPSF2-201ENST00000298875 H3BRN7 92 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 FAM110AQ9BQ89 295 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 IGKV1-6A0A0C4DH72 117 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 ZNF726P1Q15940 193 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 FREM1Q5H8C1 2179 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 G3V318 75 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 AMTNQ6UX39 209 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 BAALC-AS2P0C853 105 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 ACACBO00763 2458 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 PRR30Q53SZ7 412 aaPredicted RBP4.41□□□□□ -1.7
CPSF2-201ENST00000298875 Q6ZQT7 251 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 NDUFS7O75251 213 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 WISP1O95388 367 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 LTAP01374 205 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 TPSG1Q9NRR2 321 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 VWA8A3KMH1 1905 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 C2CD3Q4AC94 2353 aa4.41□□□□□ -1.7
CPSF2-201ENST00000298875 SLC25A29Q8N8R3 303 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 Q6Q795 121 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 MRPL53Q96EL3 112 aaKnown RBP4.4□□□□□ -1.7
CPSF2-201ENST00000298875 PRO3102Q9H379 93 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 ZNF462Q96JM2 2506 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 IGKV2D-24A0A075B6R9 120 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 IGFL3Q6UXB1 125 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 ICOSQ9Y6W8 199 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 IGHV7-4-1A0A0J9YVY3 117 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 K7EN84 100 aa4.4□□□□□ -1.7
CPSF2-201ENST00000298875 SERP2Q8N6R1 65 aa4.4□□□□□ -1.71
CPSF2-201ENST00000298875 VOPP1Q96AW1 172 aa4.4□□□□□ -1.71
CPSF2-201ENST00000298875 KIAA1671Q9BY89 1806 aa4.4□□□□□ -1.71
CPSF2-201ENST00000298875 COX7B2Q8TF08 81 aa4.4□□□□□ -1.71
CPSF2-201ENST00000298875 Q96MF0 132 aa4.4□□□□□ -1.71
CPSF2-201ENST00000298875 MSMBP08118 114 aa4.4□□□□□ -1.71
CPSF2-201ENST00000298875 C1orf195Q5TG92 126 aa4.4□□□□□ -1.71
CPSF2-201ENST00000298875 FXYD5Q96DB9 178 aa4.4□□□□□ -1.71
CPSF2-201ENST00000298875 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.4□□□□□ -1.71
CPSF2-201ENST00000298875 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 IGHV1-69P01742 117 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 ARTNQ5T4W7 220 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 ZFP2Q6ZN57 461 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 SH2D6Q7Z4S9 175 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 WDR86Q86TI4 376 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 Q8N1Y9 231 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 NTN5Q8WTR8 489 aaPredicted RBP4.39□□□□□ -1.71
CPSF2-201ENST00000298875 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 FANCD2OSQ96PS1 177 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 Q9H8V8 135 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 E7EQL1 145 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 HOXB4P17483 251 aaPredicted RBP4.39□□□□□ -1.71
CPSF2-201ENST00000298875 C17orf58Q2M2W7 97 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 FAM120AOSQ5T036 256 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 GNRH2O43555 120 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
CPSF2-201ENST00000298875 NLRC5Q86WI3 1866 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 Q9HAA7 133 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 KLK5Q9Y337 293 aaPredicted RBP4.39□□□□□ -1.71
CPSF2-201ENST00000298875 A0A0J9YY99 117 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 NDUFA4O00483 81 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 DYNAPQ8N1N2 210 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 IGKV1OR2-108A0A075B7D4 117 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 WT1-ASQ06250 92 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 FAM208BQ5VWN6 2430 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 DIAPH2-AS1Q14236 149 aa4.39□□□□□ -1.71
CPSF2-201ENST00000298875 RLFQ13129 1914 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 A0A0U1RQV1 116 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 TIRAPP58753 221 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 RPL39LQ96EH5 51 aaKnown RBP4.38□□□□□ -1.71
CPSF2-201ENST00000298875 C17orf77Q96MU5 243 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 TM2D2Q9BX73 214 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 KIAA1549LQ6ZVL6 1849 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 PLXNB1O43157 2135 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 TCF20Q9UGU0 1960 aaKnown RBP4.38□□□□□ -1.71
CPSF2-201ENST00000298875 OBSL1O75147 1896 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 BUB3O43684 328 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 ZNF524Q96C55 264 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 YPEL4Q96NS1 127 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 C8orf31Q8N9H6 132 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 Q8TCH9 128 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 OPRPNQ99935 248 aaPredicted RBP4.38□□□□□ -1.71
CPSF2-201ENST00000298875 IGLV10-54A0A075B6I4 117 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 IGKV3D-7A0A0C4DH55 119 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms