RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
CAGE1-201ENST00000296742 TEX29Q8N6K0 151 aa9.57□□□□□ -0.88
CAGE1-201ENST00000296742 SIRPDQ9H106 197 aa9.57□□□□□ -0.88
CAGE1-201ENST00000296742 ERCC8Q13216 396 aa9.57□□□□□ -0.88
CAGE1-201ENST00000296742 A6NJY4 79 aa9.56□□□□□ -0.88
CAGE1-201ENST00000296742 ZNF815PA8K554 130 aa9.56□□□□□ -0.88
CAGE1-201ENST00000296742 FABP5P3A8MUU1 101 aa9.56□□□□□ -0.88
CAGE1-201ENST00000296742 H7C1H1 209 aa9.56□□□□□ -0.88
CAGE1-201ENST00000296742 TMEM190Q8WZ59 177 aa9.56□□□□□ -0.88
CAGE1-201ENST00000296742 BRD3OSQ6XYD6 125 aa9.56□□□□□ -0.88
CAGE1-201ENST00000296742 CNFNQ9BYD5 112 aa9.56□□□□□ -0.88
CAGE1-201ENST00000296742 TMEM219Q86XT9 240 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 NPBQ8NG41 125 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 FANCD2OSQ96PS1 177 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 RNF5Q99942 180 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 PRADC1Q9BSG0 188 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 PLEKHB2Q96CS7 222 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 TLN2Q9Y4G6 2542 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 TCL1BO95988 128 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 ZNF688P0C7X2 276 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 ECSCRQ19T08 205 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 AJUBAQ96IF1 538 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 LINC00527Q9UJ94 153 aa9.55□□□□□ -0.88
CAGE1-201ENST00000296742 DOPEY2Q9Y3R5 2298 aa9.54□□□□□ -0.88
CAGE1-201ENST00000296742 A8MWV9 139 aa9.54□□□□□ -0.88
CAGE1-201ENST00000296742 RPL7P18124 248 aaKnown RBP9.54□□□□□ -0.88
CAGE1-201ENST00000296742 COX8CQ7Z4L0 72 aa9.54□□□□□ -0.88
CAGE1-201ENST00000296742 NRACQ8N912 160 aa9.54□□□□□ -0.88
CAGE1-201ENST00000296742 SCGB3A1Q96QR1 104 aa9.54□□□□□ -0.88
CAGE1-201ENST00000296742 IGHV4-61A0A0C4DH41 118 aa9.54□□□□□ -0.88
CAGE1-201ENST00000296742 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
CAGE1-201ENST00000296742 TRBV20-1A0A075B6N2 111 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 IGHV7-81A0A0B4J1V7 117 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 SCGB1C2P0DMR2 95 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 SLC25A16P16260 332 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 IL17RELQ6ZVW7 336 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 KLHL30-AS1Q8NEE0 82 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 CCL19Q99731 98 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 PRAC2D3DTV9 90 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 LINC01619G3V211 115 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 G3V318 75 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 C1orf122Q6ZSJ8 110 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 Q8N9W7 124 aa9.53□□□□□ -0.88
CAGE1-201ENST00000296742 CUBNO60494 3623 aa9.52□□□□□ -0.88
CAGE1-201ENST00000296742 NBPF19A0A087WUL8 3843 aa9.52□□□□□ -0.88
CAGE1-201ENST00000296742 UBE2D1P51668 147 aa9.52□□□□□ -0.88
CAGE1-201ENST00000296742 UBE2D3P61077 147 aa9.52□□□□□ -0.88
CAGE1-201ENST00000296742 UBE2D2P62837 147 aa9.52□□□□□ -0.88
CAGE1-201ENST00000296742 LYRM7Q5U5X0 104 aa9.52□□□□□ -0.88
CAGE1-201ENST00000296742 SHISA2Q6UWI4 295 aa9.52□□□□□ -0.88
CAGE1-201ENST00000296742 IGKV3D-20A0A0C4DH25 116 aa9.52□□□□□ -0.89
CAGE1-201ENST00000296742 CENPVL3A0A0U1RRI6 287 aa9.52□□□□□ -0.89
CAGE1-201ENST00000296742 IGHG4P01861 327 aa9.52□□□□□ -0.89
CAGE1-201ENST00000296742 UBE2E1P51965 193 aa9.52□□□□□ -0.89
CAGE1-201ENST00000296742 RNF182Q8N6D2 247 aa9.52□□□□□ -0.89
CAGE1-201ENST00000296742 NAV2Q8IVL1 2488 aa9.52□□□□□ -0.89
CAGE1-201ENST00000296742 SPANXN1Q5VSR9 72 aa9.51□□□□□ -0.89
CAGE1-201ENST00000296742 Q8N6K4 173 aa9.51□□□□□ -0.89
CAGE1-201ENST00000296742 BBC3Q96PG8 261 aaPredicted RBP9.51□□□□□ -0.89
CAGE1-201ENST00000296742 IGLV11-55A0A075B6I3 123 aa9.51□□□□□ -0.89
CAGE1-201ENST00000296742 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
CAGE1-201ENST00000296742 ATP5J2P56134 94 aa9.51□□□□□ -0.89
CAGE1-201ENST00000296742 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
CAGE1-201ENST00000296742 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
CAGE1-201ENST00000296742 MXRA5Q9NR99 2828 aa9.51□□□□□ -0.89
CAGE1-201ENST00000296742 IGHV4-30-2A0A087WSY4 118 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 TRAV8-2A0A0B4J237 113 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 TRAV12-1A0A0B4J245 112 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 ATP6V0E1O15342 81 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
CAGE1-201ENST00000296742 MINOS1Q5TGZ0 78 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 NDUFA11Q86Y39 141 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 VCX2Q9H322 139 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 MINOS1-NBL1R4GNA1 71 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 IGHV3OR16-13A0A075B7E8 117 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 IGHV3-74A0A0B4J1X5 117 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 NPFFO15130 113 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 EMP1P54849 157 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 MFAP4P55083 255 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 SMIM2Q9BVW6 85 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 C21orf62Q9NYP8 219 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 CD7P09564 240 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 HERV-K104P63124 156 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 GAGE2EQ4V326 116 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 Q6ZQT7 251 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 SMIM20Q8N5G0 67 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 PSMG3-AS1Q96PY0 264 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 GAGE2DQ9UEU5 116 aa9.5□□□□□ -0.89
CAGE1-201ENST00000296742 TEX15Q9BXT5 2789 aa9.49□□□□□ -0.89
CAGE1-201ENST00000296742 TMEM262E9PQX1 116 aa9.49□□□□□ -0.89
CAGE1-201ENST00000296742 SPRY2O43597 315 aa9.49□□□□□ -0.89
CAGE1-201ENST00000296742 NEXN-AS1Q8NBZ9 246 aa9.49□□□□□ -0.89
CAGE1-201ENST00000296742 MAPK1IP1LQ8NDC0 245 aa9.49□□□□□ -0.89
CAGE1-201ENST00000296742 ZNF469Q96JG9 3925 aaPredicted RBP9.49□□□□□ -0.89
CAGE1-201ENST00000296742 IGHV3-66A0A0C4DH42 116 aa9.49□□□□□ -0.89
CAGE1-201ENST00000296742 TRBV7-9A0A0J9YWB2 115 aa9.49□□□□□ -0.89
CAGE1-201ENST00000296742 CCDC179H3BU77 68 aa9.49□□□□□ -0.89
CAGE1-201ENST00000296742 SNCGO76070 127 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms