RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 RPL36ALQ969Q0 106 aaKnown RBP10.54□□□□□ -0.72
HPS3-201ENST00000296051 ARHGAP32A7KAX9 2087 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 TRBV7-9A0A0J9YWB2 115 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 BLCAPP62952 87 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 ANXA2RQ3ZCQ2 193 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 C2orf66Q6UXQ4 117 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 C10orf126Q8N4M7 172 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 ACANP16112 2415 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 LTBP2Q14767 1821 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 TRBV25-1A0A075B6N4 114 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 IGKV1-17P01599 117 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 GP9P14770 177 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 CTRLP40313 264 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 DAD1P61803 113 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
HPS3-201ENST00000296051 TNRC6AQ8NDV7 1962 aaKnown RBP10.53□□□□□ -0.72
HPS3-201ENST00000296051 ELANEP08246 267 aa10.52□□□□□ -0.72
HPS3-201ENST00000296051 RBX1P62877 108 aa10.52□□□□□ -0.72
HPS3-201ENST00000296051 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.72
HPS3-201ENST00000296051 ZNF843Q8N446 348 aa10.52□□□□□ -0.72
HPS3-201ENST00000296051 NUP210LQ5VU65 1888 aa10.52□□□□□ -0.72
HPS3-201ENST00000296051 ZMAT4Q9H898 229 aa10.52□□□□□ -0.73
HPS3-201ENST00000296051 ADARB2-AS1A8MUL3 147 aa10.52□□□□□ -0.73
HPS3-201ENST00000296051 PDE6HQ13956 83 aa10.52□□□□□ -0.73
HPS3-201ENST00000296051 C8orf86Q6ZUL3 223 aa10.52□□□□□ -0.73
HPS3-201ENST00000296051 LINC00477Q96M19 166 aa10.52□□□□□ -0.73
HPS3-201ENST00000296051 C19orf84I3L1E1 186 aa10.52□□□□□ -0.73
HPS3-201ENST00000296051 HLA-DRB4P13762 266 aa10.52□□□□□ -0.73
HPS3-201ENST00000296051 HLA-DRB4X5D2U9 266 aa10.52□□□□□ -0.73
HPS3-201ENST00000296051 H3BRN7 92 aa10.51□□□□□ -0.73
HPS3-201ENST00000296051 C12orf74Q32Q52 190 aa10.51□□□□□ -0.73
HPS3-201ENST00000296051 CEND1Q8N111 149 aa10.51□□□□□ -0.73
HPS3-201ENST00000296051 SPXQ9BT56 116 aa10.51□□□□□ -0.73
HPS3-201ENST00000296051 CCL24O00175 119 aa10.5□□□□□ -0.73
HPS3-201ENST00000296051 CD28P10747 220 aa10.5□□□□□ -0.73
HPS3-201ENST00000296051 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
HPS3-201ENST00000296051 Q8N8P6 123 aa10.5□□□□□ -0.73
HPS3-201ENST00000296051 COPS9Q8WXC6 57 aa10.5□□□□□ -0.73
HPS3-201ENST00000296051 WFDC11Q8NEX6 87 aa10.49□□□□□ -0.73
HPS3-201ENST00000296051 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
HPS3-201ENST00000296051 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
HPS3-201ENST00000296051 C1orf159Q96HA4 380 aa10.49□□□□□ -0.73
HPS3-201ENST00000296051 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
HPS3-201ENST00000296051 CENPVL3A0A0U1RRI6 287 aa10.49□□□□□ -0.73
HPS3-201ENST00000296051 LHBP01229 141 aa10.49□□□□□ -0.73
HPS3-201ENST00000296051 TMEM14CQ9P0S9 112 aa10.49□□□□□ -0.73
HPS3-201ENST00000296051 CELSR3Q9NYQ7 3312 aa10.49□□□□□ -0.73
HPS3-201ENST00000296051 ZNF625Q96I27 306 aaPredicted RBP10.49□□□□□ -0.73
HPS3-201ENST00000296051 TRAV8-4A0A0B4J246 113 aa10.48□□□□□ -0.73
HPS3-201ENST00000296051 F8W1H4 67 aa10.48□□□□□ -0.73
HPS3-201ENST00000296051 HOXB4P17483 251 aaPredicted RBP10.48□□□□□ -0.73
HPS3-201ENST00000296051 ZFP36P26651 326 aaKnown RBP10.48□□□□□ -0.73
HPS3-201ENST00000296051 LINC00311Q8N616 119 aa10.48□□□□□ -0.73
HPS3-201ENST00000296051 FOXE3Q13461 319 aa10.48□□□□□ -0.73
HPS3-201ENST00000296051 NCOR1P1Q9H4R4 102 aa10.48□□□□□ -0.73
HPS3-201ENST00000296051 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 GAGE7O76087 117 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 ATP6V0BQ99437 205 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 KLK9Q9UKQ9 250 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 F8VRH5 84 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 APOC4P55056 127 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 NCKAP5O14513 1909 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 IGKV1D-37A0A075B6S9 117 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 IGHV3-16A0A0C4DH30 117 aa10.47□□□□□ -0.73
HPS3-201ENST00000296051 Q8N7P7 452 aa10.46□□□□□ -0.73
HPS3-201ENST00000296051 MBD6Q96DN6 1003 aa10.46□□□□□ -0.73
HPS3-201ENST00000296051 F6UB75 175 aa10.46□□□□□ -0.73
HPS3-201ENST00000296051 HOXD3P31249 432 aaPredicted RBP10.46□□□□□ -0.73
HPS3-201ENST00000296051 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
HPS3-201ENST00000296051 C2orf82Q6UX34 121 aa10.46□□□□□ -0.73
HPS3-201ENST00000296051 CFHR4Q92496 578 aa10.46□□□□□ -0.73
HPS3-201ENST00000296051 AGPAT4-IT1Q9H0P7 198 aa10.46□□□□□ -0.73
HPS3-201ENST00000296051 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.74
HPS3-201ENST00000296051 TRAV8-3A0A0A6YYJ7 113 aa10.45□□□□□ -0.74
HPS3-201ENST00000296051 A0A1B0GXF2 115 aa10.45□□□□□ -0.74
HPS3-201ENST00000296051 SMIM2Q9BVW6 85 aa10.45□□□□□ -0.74
HPS3-201ENST00000296051 IGLL5B9A064 214 aa10.45□□□□□ -0.74
HPS3-201ENST00000296051 K7EIM0 57 aa10.45□□□□□ -0.74
HPS3-201ENST00000296051 VCYO14598 125 aa10.45□□□□□ -0.74
HPS3-201ENST00000296051 EIF4EBP1Q13541 118 aaPredicted RBP10.45□□□□□ -0.74
HPS3-201ENST00000296051 REV3LO60673 3130 aa10.45□□□□□ -0.74
HPS3-201ENST00000296051 M0R2P5 195 aa10.45□□□□□ -0.74
HPS3-201ENST00000296051 PRAC2D3DTV9 90 aa10.44□□□□□ -0.74
HPS3-201ENST00000296051 NDUFA4O00483 81 aa10.44□□□□□ -0.74
HPS3-201ENST00000296051 FBXL19-AS1Q494R0 122 aa10.44□□□□□ -0.74
HPS3-201ENST00000296051 BOD1L2Q8IYS8 172 aa10.44□□□□□ -0.74
HPS3-201ENST00000296051 C19orf71A6NCJ1 209 aa10.44□□□□□ -0.74
HPS3-201ENST00000296051 DEFB1P60022 68 aa10.44□□□□□ -0.74
HPS3-201ENST00000296051 A0A096LPF7 62 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 INAFM1C9JVW0 142 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 GAGE4Q13068 117 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 GAGE5Q13069 117 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 TRAV13-1A0A0B4J241 112 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms