RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TRAV21A0A0B4J279 112 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 PGPEP1LA6NFU8 196 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 FBLL1A6NHQ2 334 aaKnown RBP6.13□□□□□ -1.43
CNOT9-202ENST00000295701 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
CNOT9-202ENST00000295701 HMGB3O15347 200 aaKnown RBP6.13□□□□□ -1.43
CNOT9-202ENST00000295701 PFN1P07737 140 aaKnown RBP6.13□□□□□ -1.43
CNOT9-202ENST00000295701 LELP1Q5T871 98 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 Q6ZSA8 131 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 SH2D6Q7Z4S9 175 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 TMEM75Q8N9X5 138 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 DNAJC30Q96LL9 226 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 SMIM3Q9BZL3 60 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 NMES1Q9C002 83 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 TREM1Q9NP99 234 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 MBD2Q9UBB5 411 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 Q9UF83 564 aa6.13□□□□□ -1.43
CNOT9-202ENST00000295701 C17orf112F2Z3M2 114 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 ZNF876PQ49A33 203 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 KHDC3LQ587J8 217 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 ATP6V0E2Q8NHE4 81 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 CMTM2Q8TAZ6 248 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 TMED6Q8WW62 240 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 ASB13Q8WXK3 278 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 ATP5SQ99766 215 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 WFDC1Q9HC57 220 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 SDF2L1Q9HCN8 221 aa6.12□□□□□ -1.43
CNOT9-202ENST00000295701 TRBV6-4A0A1B0GX49 114 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 C1QBP02746 253 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 RAB2AP61019 212 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 RHOHQ15669 191 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 ZNF506Q5JVG8 444 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 DAZ4Q86SG3 579 aaKnown RBP6.11□□□□□ -1.43
CNOT9-202ENST00000295701 BAALCQ8WXS3 180 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 PRADC1Q9BSG0 188 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 GTSF1LQ9H1H1 148 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 DAZ3Q9NR90 486 aaKnown RBP6.11□□□□□ -1.43
CNOT9-202ENST00000295701 KCNIP2Q9NS61 270 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 HSPB11Q9Y547 144 aa6.11□□□□□ -1.43
CNOT9-202ENST00000295701 GAGE12JA6NER3 117 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 H2BFSP57053 126 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 TAS2R45P59539 299 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
CNOT9-202ENST00000295701 GAGE1Q13065 139 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 GAGE4Q13068 117 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 GAGE5Q13069 117 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 GAGE13Q4V321 117 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 SCGB1C1Q8TD33 95 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 PPP1R1CQ8WVI7 109 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 KCNS1Q96KK3 526 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 CCDC32Q9BV29 185 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 SAMD10Q9BYL1 202 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 JPT2Q9H910 190 aa6.1□□□□□ -1.43
CNOT9-202ENST00000295701 RNASE3P12724 160 aaKnown RBP6.09□□□□□ -1.43
CNOT9-202ENST00000295701 MZT2BQ6NZ67 158 aa6.09□□□□□ -1.43
CNOT9-202ENST00000295701 SCXQ7RTU7 201 aa6.09□□□□□ -1.43
CNOT9-202ENST00000295701 OR2T35Q8NGX2 323 aa6.09□□□□□ -1.43
CNOT9-202ENST00000295701 DEFB104AQ8WTQ1 72 aa6.09□□□□□ -1.43
CNOT9-202ENST00000295701 TM2D2Q9BX73 214 aa6.09□□□□□ -1.43
CNOT9-202ENST00000295701 A0A1W2PPV4 95 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 MPC2O95563 127 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 GCGP01275 180 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 IGLV2-11P01706 119 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 ARL14EPLP0DKL9 152 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 LINC00694P0DN24 101 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 RPL12P30050 165 aaKnown RBP6.08□□□□□ -1.44
CNOT9-202ENST00000295701 IFITM3Q01628 133 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 ASAH1Q13510 395 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 LAGE3Q14657 143 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 ACOT6Q3I5F7 207 aaPredicted RBP6.08□□□□□ -1.44
CNOT9-202ENST00000295701 FAM74A1Q5RGS3 127 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 C14orf178Q8N769 122 aaPredicted RBP6.08□□□□□ -1.44
CNOT9-202ENST00000295701 PSG8Q9UQ74 426 aa6.08□□□□□ -1.44
CNOT9-202ENST00000295701 TRAV8-3A0A0A6YYJ7 113 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 IGKV3D-20A0A0C4DH25 116 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 INMT-MINDY4F8WBC2 141 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 TAAR5O14804 337 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 MGST1P10620 155 aaKnown RBP6.07□□□□□ -1.44
CNOT9-202ENST00000295701 CYCSP99999 105 aaKnown RBP6.07□□□□□ -1.44
CNOT9-202ENST00000295701 PQLC2Q6ZP29 291 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 PRNTQ86SH4 94 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 ARL6IP6Q8N6S5 226 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 OR10G9Q8NGN4 311 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 OR10G7Q8NGN6 311 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 ENKURQ8TC29 256 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 PARLQ9H300 379 aa6.07□□□□□ -1.44
CNOT9-202ENST00000295701 IGKV2D-24A0A075B6R9 120 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 TRAV34A0A0B4J273 112 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 RNF222A6NCQ9 220 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 RBFOX3A6NFN3 312 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 CIDEAO60543 219 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 TCRAP04437 139 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 LGALSLQ3ZCW2 172 aaPredicted RBP6.06□□□□□ -1.44
CNOT9-202ENST00000295701 UFSP1Q6NVU6 142 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 CIRBP-AS1Q8TBR5 109 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 PTH2Q96A98 100 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 LINC00479Q96M42 142 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 NDFIP1Q9BT67 221 aa6.06□□□□□ -1.44
CNOT9-202ENST00000295701 GGTLC3B5MD39 225 aa6.05□□□□□ -1.44
CNOT9-202ENST00000295701 GCHFRP30047 84 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms