RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 SNCGO76070 127 aa7.83□□□□□ -1.16
LMX1A-201ENST00000294816 CFC1BP0CG36 223 aa7.83□□□□□ -1.16
LMX1A-201ENST00000294816 CFC1P0CG37 223 aa7.83□□□□□ -1.16
LMX1A-201ENST00000294816 C1orf122Q6ZSJ8 110 aa7.83□□□□□ -1.16
LMX1A-201ENST00000294816 PSMG3-AS1Q96PY0 264 aa7.83□□□□□ -1.16
LMX1A-201ENST00000294816 SPTA1P02549 2419 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 A0A0J9YY99 117 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 ASIPP42127 132 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 GAGE5Q13069 117 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 GAGE6Q13070 117 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 ATMQ13315 3056 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 IGHV7-81A0A0B4J1V7 117 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 G3V318 75 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 IGHV4-39P01824 125 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 RNASE4P34096 147 aaKnown RBP7.82□□□□□ -1.16
LMX1A-201ENST00000294816 RPL39P62891 51 aaKnown RBP7.82□□□□□ -1.16
LMX1A-201ENST00000294816 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 GAGE2EQ4V326 116 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 GAGE2DQ9UEU5 116 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 PRO1854Q9UHT4 67 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 TRAV2A0A0B4J234 112 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 TMEM262E9PQX1 116 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 LGALS3P17931 250 aaKnown RBP7.82□□□□□ -1.16
LMX1A-201ENST00000294816 CRIP2P52943 208 aaPredicted RBP7.82□□□□□ -1.16
LMX1A-201ENST00000294816 C10orf126Q8N4M7 172 aa7.82□□□□□ -1.16
LMX1A-201ENST00000294816 TTC32Q5I0X7 151 aa7.81□□□□□ -1.16
LMX1A-201ENST00000294816 VMO1Q7Z5L0 202 aa7.81□□□□□ -1.16
LMX1A-201ENST00000294816 VCX2Q9H322 139 aa7.81□□□□□ -1.16
LMX1A-201ENST00000294816 GNRH2O43555 120 aa7.81□□□□□ -1.16
LMX1A-201ENST00000294816 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
LMX1A-201ENST00000294816 NTN5Q8WTR8 489 aaPredicted RBP7.81□□□□□ -1.16
LMX1A-201ENST00000294816 TIMD4Q96H15 378 aa7.81□□□□□ -1.16
LMX1A-201ENST00000294816 ATP6V0E1O15342 81 aa7.8□□□□□ -1.16
LMX1A-201ENST00000294816 COX6B1P14854 86 aa7.8□□□□□ -1.16
LMX1A-201ENST00000294816 LINC00527Q9UJ94 153 aa7.8□□□□□ -1.16
LMX1A-201ENST00000294816 LRBAP50851 2863 aa7.8□□□□□ -1.16
LMX1A-201ENST00000294816 A4D1N5 150 aa7.8□□□□□ -1.16
LMX1A-201ENST00000294816 OR10J6PQ8NGY7 276 aa7.8□□□□□ -1.16
LMX1A-201ENST00000294816 AKAP6Q13023 2319 aa7.8□□□□□ -1.16
LMX1A-201ENST00000294816 CLPSL1A2RUU4 121 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 IGHV3-30P01768 117 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 IGHV3-30-5P0DP03 117 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 IGFL3Q6UXB1 125 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 ANKHD1Q8IWZ3 2542 aaKnown RBP7.79□□□□□ -1.16
LMX1A-201ENST00000294816 A0A087WWL8 130 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 TRAV4A0A0B4J268 109 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 TRAV21A0A0B4J279 112 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 F6UB75 175 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 CRYGDP07320 174 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 TCF15Q12870 199 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 PMVKQ15126 192 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 C9orf47Q6ZRZ4 202 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 AJUBAQ96IF1 538 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 C20orf173Q96LM9 149 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 ZNF256Q9Y2P7 627 aaPredicted RBP7.79□□□□□ -1.16
LMX1A-201ENST00000294816 IGHV4-4A0A075B6R2 117 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 FAM74A4Q5TZK3 123 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 CCDC140Q96MF4 163 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 JPT2Q9H910 190 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 BDP1A6H8Y1 2624 aa7.79□□□□□ -1.16
LMX1A-201ENST00000294816 RIF1Q5UIP0 2472 aaKnown RBP7.78□□□□□ -1.16
LMX1A-201ENST00000294816 J3QQQ9 107 aa7.78□□□□□ -1.16
LMX1A-201ENST00000294816 ANKRD11Q6UB99 2663 aaPredicted RBP7.78□□□□□ -1.16
LMX1A-201ENST00000294816 IGLV4-69A0A075B6H9 119 aa7.78□□□□□ -1.16
LMX1A-201ENST00000294816 CRLF1O75462 422 aa7.78□□□□□ -1.16
LMX1A-201ENST00000294816 FAM110DQ8TAY7 271 aaPredicted RBP7.78□□□□□ -1.16
LMX1A-201ENST00000294816 EEF1AKMT3Q96AZ1 226 aa7.78□□□□□ -1.16
LMX1A-201ENST00000294816 CCDC179H3BU77 68 aa7.77□□□□□ -1.16
LMX1A-201ENST00000294816 TSHBP01222 138 aa7.77□□□□□ -1.16
LMX1A-201ENST00000294816 PRR30Q53SZ7 412 aaPredicted RBP7.77□□□□□ -1.16
LMX1A-201ENST00000294816 PAPPA-AS1Q5QFB9 102 aa7.77□□□□□ -1.16
LMX1A-201ENST00000294816 Q8N9W7 124 aa7.77□□□□□ -1.16
LMX1A-201ENST00000294816 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.16
LMX1A-201ENST00000294816 SLC25A29Q8N8R3 303 aa7.77□□□□□ -1.17
LMX1A-201ENST00000294816 LY6G5BQ8NDX9 201 aa7.77□□□□□ -1.17
LMX1A-201ENST00000294816 NDUFV3P56181 108 aaKnown RBP7.77□□□□□ -1.17
LMX1A-201ENST00000294816 TRAV8-4A0A0B4J246 113 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 ODF3BA8MYP8 253 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 PRSS2P07478 247 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 PTPRZ1P23471 2315 aaPredicted RBP7.76□□□□□ -1.17
LMX1A-201ENST00000294816 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 RNF223E7ERA6 249 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
LMX1A-201ENST00000294816 Q8N1Y9 231 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 SMIM20Q8N5G0 67 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 ZFAND2AQ8N6M9 145 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 ZNRF2Q8NHG8 242 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 TEX49A0A1B0GTD5 131 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 GAGE12JA6NER3 117 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 GAGE7O76087 117 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 GAGE12FP0CL80 117 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 GAGE12GP0CL81 117 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 GAGE12IP0CL82 117 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 SRD5A1P18405 259 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 GAGE4Q13068 117 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 MUSTN1Q8IVN3 82 aa7.76□□□□□ -1.17
LMX1A-201ENST00000294816 OTOGLQ3ZCN5 2332 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 NHLRC4P0CG21 123 aaPredicted RBP7.75□□□□□ -1.17
LMX1A-201ENST00000294816 IFITM1P13164 125 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms