RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 FAM159AQ6UWV7 190 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 RAX2Q96IS3 184 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 NDUFAF3Q9BU61 184 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 CRXO43186 299 aaPredicted RBP6.83□□□□□ -1.32
PDPN-201ENST00000294489 KIR3DS1Q14943 382 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 C14orf144Q96I85 54 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 TSSC4Q9Y5U2 329 aaPredicted RBP6.83□□□□□ -1.32
PDPN-201ENST00000294489 HECTD1Q9ULT8 2610 aa6.83□□□□□ -1.32
PDPN-201ENST00000294489 SYS1-DBNDD2H3BUS1 97 aa6.82□□□□□ -1.32
PDPN-201ENST00000294489 TSPOP30536 169 aa6.82□□□□□ -1.32
PDPN-201ENST00000294489 ADARB2-AS1A8MUL3 147 aa6.82□□□□□ -1.32
PDPN-201ENST00000294489 M0R381 172 aa6.82□□□□□ -1.32
PDPN-201ENST00000294489 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
PDPN-201ENST00000294489 FOXI2Q6ZQN5 318 aa6.82□□□□□ -1.32
PDPN-201ENST00000294489 DLX4Q92988 240 aaPredicted RBP6.82□□□□□ -1.32
PDPN-201ENST00000294489 C7orf71A4D174 169 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 SPATA45Q537H7 98 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 ZNF705AQ6ZN79 300 aaPredicted RBP6.81□□□□□ -1.32
PDPN-201ENST00000294489 DYNLRB2Q8TF09 96 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 DUX3Q96PT4 197 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 NXT2Q9NPJ8 142 aaKnown RBP6.81□□□□□ -1.32
PDPN-201ENST00000294489 MYO9AB2RTY4 2548 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 SONP18583 2426 aaKnown RBP6.81□□□□□ -1.32
PDPN-201ENST00000294489 TRAV12-3A0A0B4J271 114 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 INAFM1C9JVW0 142 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 GNRH2O43555 120 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 IGKV3-20P01619 116 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 LINC00173Q6ZV60 143 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 A8MTW9 85 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 CRLF1O75462 422 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 CDKN1BP46527 198 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 ATOH7Q8N100 152 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 CITED2Q99967 270 aaPredicted RBP6.81□□□□□ -1.32
PDPN-201ENST00000294489 MIEN1Q9BRT3 115 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 SCRT2Q9NQ03 307 aa6.81□□□□□ -1.32
PDPN-201ENST00000294489 HBDP02042 147 aa6.8□□□□□ -1.32
PDPN-201ENST00000294489 OR2K2Q8NGT1 345 aa6.8□□□□□ -1.32
PDPN-201ENST00000294489 MRAP2Q96G30 205 aa6.8□□□□□ -1.32
PDPN-201ENST00000294489 ZNF747Q9BV97 191 aa6.8□□□□□ -1.32
PDPN-201ENST00000294489 TRAV9-2A0A087WT02 112 aa6.8□□□□□ -1.32
PDPN-201ENST00000294489 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
PDPN-201ENST00000294489 DPH3P1Q9H4G8 78 aa6.8□□□□□ -1.32
PDPN-201ENST00000294489 ACANP16112 2415 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 OR4C46A6NHA9 309 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 CCL24O00175 119 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 CD7P09564 240 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 AP1S3Q96PC3 154 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 TRAV25A0A0B4J276 109 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 H0Y8G0 127 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 GAS8-AS1O95177 125 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 DEFB131AP59861 70 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 SPINK13Q1W4C9 94 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 DEFB114Q30KQ6 69 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 TMEM61Q8N0U2 210 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 C11orf44Q8N8P7 122 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 TRAV12-2A0A075B6T6 113 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 A0A096LNJ9 63 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 GATA1P15976 413 aaPredicted RBP6.79□□□□□ -1.32
PDPN-201ENST00000294489 KRTAP10-3P60369 221 aa6.79□□□□□ -1.32
PDPN-201ENST00000294489 TRAV26-2A0A0B4J265 109 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 A0A1W2PRX2 142 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 LINC01546A6NGU7 62 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 SPATA12Q7Z6I5 190 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 C14orf178Q8N769 122 aaPredicted RBP6.78□□□□□ -1.32
PDPN-201ENST00000294489 Q8N8P6 123 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 SPRY2O43597 315 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 SMIM17P0DL12 118 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 DEFB125Q8N687 156 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 NRACQ8N912 160 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
PDPN-201ENST00000294489 NXPH4O95158 308 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
PDPN-201ENST00000294489 HIST2H2BDQ6DRA6 164 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 IGHV1OR15-1A0A075B7D0 117 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 TMEM238C9JI98 176 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 MGPP08493 103 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 IGLC3P0DOY3 106 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 HLA-DRB4P13762 266 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 FCER1GP30273 86 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 FXYD7P58549 80 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 LINC01545Q5VT33 79 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 NDUFA11Q86Y39 141 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 SPAG8Q99932 426 aaPredicted RBP6.77□□□□□ -1.33
PDPN-201ENST00000294489 ZNF256Q9Y2P7 627 aaPredicted RBP6.77□□□□□ -1.33
PDPN-201ENST00000294489 GOLT1BQ9Y3E0 138 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 HLA-DRB4X5D2U9 266 aa6.77□□□□□ -1.33
PDPN-201ENST00000294489 KNCNA6PVL3 124 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 PPP1R17O96001 155 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 CD300EQ496F6 205 aaPredicted RBP6.76□□□□□ -1.33
PDPN-201ENST00000294489 SYT8Q8NBV8 401 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 IFI27L1Q96BM0 104 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 IGHV3-16A0A0C4DH30 117 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 CBY3A6NI87 242 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 H3BMM0 161 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 M0R143 59 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 IGLL1P15814 213 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 Q8N1Y9 231 aa6.76□□□□□ -1.33
PDPN-201ENST00000294489 CITED1Q99966 193 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms