RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 S100A4P26447 101 aaKnown RBP12.37□□□□□ -0.43
HIF3A-203ENST00000291300 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
HIF3A-203ENST00000291300 NSUN5P1Q3KNT7 163 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 SPATA12Q7Z6I5 190 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 CHCHD1Q96BP2 118 aaKnown RBP12.37□□□□□ -0.43
HIF3A-203ENST00000291300 MAP6D1Q9H9H5 199 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 ZNF256Q9Y2P7 627 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-203ENST00000291300 LEPP41159 167 aa12.36□□□□□ -0.43
HIF3A-203ENST00000291300 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
HIF3A-203ENST00000291300 FLNBO75369 2602 aaKnown RBP12.36□□□□□ -0.43
HIF3A-203ENST00000291300 CDKN1BP46527 198 aa12.35□□□□□ -0.43
HIF3A-203ENST00000291300 H3BMM0 161 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 CRXO43186 299 aaPredicted RBP12.34□□□□□ -0.43
HIF3A-203ENST00000291300 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 PRSS3P2Q8NHM4 247 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
HIF3A-203ENST00000291300 PRM2P04554 102 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 CD7P09564 240 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 CACNG7P62955 275 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 PHLDA3Q9Y5J5 127 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
HIF3A-203ENST00000291300 A0A096LNJ9 63 aa12.33□□□□□ -0.44
HIF3A-203ENST00000291300 S100A12P80511 92 aa12.33□□□□□ -0.44
HIF3A-203ENST00000291300 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
HIF3A-203ENST00000291300 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
HIF3A-203ENST00000291300 ODF3L2Q3SX64 289 aa12.32□□□□□ -0.44
HIF3A-203ENST00000291300 C14orf178Q8N769 122 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-203ENST00000291300 JPT2Q9H910 190 aa12.32□□□□□ -0.44
HIF3A-203ENST00000291300 TNFRSF6BO95407 300 aa12.32□□□□□ -0.44
HIF3A-203ENST00000291300 FA2HQ7L5A8 372 aa12.32□□□□□ -0.44
HIF3A-203ENST00000291300 Q8N1Y9 231 aa12.32□□□□□ -0.44
HIF3A-203ENST00000291300 JMJD8Q96S16 334 aa12.32□□□□□ -0.44
HIF3A-203ENST00000291300 AP5S1Q9NUS5 200 aa12.32□□□□□ -0.44
HIF3A-203ENST00000291300 JMJD1CQ15652 2540 aa12.31□□□□□ -0.44
HIF3A-203ENST00000291300 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
HIF3A-203ENST00000291300 A8MTW9 85 aa12.31□□□□□ -0.44
HIF3A-203ENST00000291300 TCF21O43680 179 aa12.31□□□□□ -0.44
HIF3A-203ENST00000291300 MED14OSP0DP75 135 aa12.31□□□□□ -0.44
HIF3A-203ENST00000291300 TEX43Q6ZNM6 134 aa12.31□□□□□ -0.44
HIF3A-203ENST00000291300 NRACQ8N912 160 aa12.31□□□□□ -0.44
HIF3A-203ENST00000291300 SPAG8Q99932 426 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-203ENST00000291300 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
HIF3A-203ENST00000291300 MCRIP2Q9BUT9 160 aaKnown RBP12.3□□□□□ -0.44
HIF3A-203ENST00000291300 TENM1Q9UKZ4 2725 aa12.3□□□□□ -0.44
HIF3A-203ENST00000291300 LEPROTL1O95214 131 aa12.29□□□□□ -0.44
HIF3A-203ENST00000291300 TSPOP30536 169 aa12.29□□□□□ -0.44
HIF3A-203ENST00000291300 PKIAP61925 76 aa12.29□□□□□ -0.44
HIF3A-203ENST00000291300 IGHV1OR15-1A0A075B7D0 117 aa12.29□□□□□ -0.44
HIF3A-203ENST00000291300 OR4C46A6NHA9 309 aa12.29□□□□□ -0.44
HIF3A-203ENST00000291300 SAP30O75446 220 aa12.29□□□□□ -0.44
HIF3A-203ENST00000291300 NXPH4O95158 308 aa12.29□□□□□ -0.44
HIF3A-203ENST00000291300 PPBPP02775 128 aa12.28□□□□□ -0.44
HIF3A-203ENST00000291300 MAJINQ3KP22 176 aa12.28□□□□□ -0.44
HIF3A-203ENST00000291300 SMIM15Q7Z3B0 74 aa12.28□□□□□ -0.44
HIF3A-203ENST00000291300 OR2K2Q8NGT1 345 aa12.28□□□□□ -0.44
HIF3A-203ENST00000291300 C9orf85Q96MD7 179 aa12.28□□□□□ -0.44
HIF3A-203ENST00000291300 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
HIF3A-203ENST00000291300 SPATA3Q8NHX4 192 aa12.28□□□□□ -0.44
HIF3A-203ENST00000291300 PAM16Q9Y3D7 125 aa12.28□□□□□ -0.44
HIF3A-203ENST00000291300 VWFP04275 2813 aa12.27□□□□□ -0.44
HIF3A-203ENST00000291300 HTN1P15515 57 aa12.27□□□□□ -0.45
HIF3A-203ENST00000291300 LINC00315P59091 139 aa12.27□□□□□ -0.45
HIF3A-203ENST00000291300 RPL39LQ96EH5 51 aaKnown RBP12.27□□□□□ -0.45
HIF3A-203ENST00000291300 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
HIF3A-203ENST00000291300 KIF25-AS1Q9Y6Z4 181 aa12.27□□□□□ -0.45
HIF3A-203ENST00000291300 F8P00451 2351 aa12.27□□□□□ -0.45
HIF3A-203ENST00000291300 IGLV2-18A0A075B6J9 118 aa12.26□□□□□ -0.45
HIF3A-203ENST00000291300 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
HIF3A-203ENST00000291300 MGPP08493 103 aa12.26□□□□□ -0.45
HIF3A-203ENST00000291300 CRLF1O75462 422 aa12.26□□□□□ -0.45
HIF3A-203ENST00000291300 WFDC10AQ9H1F0 79 aa12.26□□□□□ -0.45
HIF3A-203ENST00000291300 DPH3P1Q9H4G8 78 aa12.26□□□□□ -0.45
HIF3A-203ENST00000291300 A0A087WWL8 130 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 H0Y8G0 127 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 SYS1-DBNDD2H3BUS1 97 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 RASL10AQ92737 203 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 TMEM70Q9BUB7 260 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 KIR2DL5BA0A0G2JN68 375 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 KIR2DL5BA0A0G2JPC4 375 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 TSTD3H0UI37 97 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 FOSL1P15407 271 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 KIR2DL5AQ8N109 375 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 ZNF747Q9BV97 191 aa12.25□□□□□ -0.45
HIF3A-203ENST00000291300 DDTP30046 118 aa12.24□□□□□ -0.45
HIF3A-203ENST00000291300 LAMTOR2Q9Y2Q5 125 aa12.24□□□□□ -0.45
HIF3A-203ENST00000291300 CBY3A6NI87 242 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 IGLV1-51P01701 117 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 AP1S3Q96PC3 154 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 PMCHL2Q9BQD1 86 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 LINC01546A6NGU7 62 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 TCAPO15273 167 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 NDUFA11Q86Y39 141 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 MRAP2Q96G30 205 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 VAMP8Q9BV40 100 aa12.23□□□□□ -0.45
HIF3A-203ENST00000291300 XCL2Q9UBD3 114 aa12.22□□□□□ -0.45
HIF3A-203ENST00000291300 OR11H12B2RN74 326 aa12.22□□□□□ -0.45
HIF3A-203ENST00000291300 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-203ENST00000291300 Q8N8P6 123 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms