RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 KRTAP10-11P60412 298 aa9.73□□□□□ -0.85
ACER3-201ENST00000278544 RIGQ13278 110 aa9.73□□□□□ -0.85
ACER3-201ENST00000278544 TMEM256Q8N2U0 113 aa9.73□□□□□ -0.85
ACER3-201ENST00000278544 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
ACER3-201ENST00000278544 CT83Q5H943 113 aa9.72□□□□□ -0.85
ACER3-201ENST00000278544 TRPT1Q86TN4 253 aaKnown RBP9.72□□□□□ -0.85
ACER3-201ENST00000278544 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
ACER3-201ENST00000278544 Q6AWC8 147 aa9.72□□□□□ -0.85
ACER3-201ENST00000278544 NUTF2P61970 127 aaKnown RBP9.72□□□□□ -0.85
ACER3-201ENST00000278544 LURAP1LQ8IV03 231 aa9.72□□□□□ -0.85
ACER3-201ENST00000278544 NUPR1O60356 82 aa9.71□□□□□ -0.85
ACER3-201ENST00000278544 BAGE3Q86Y29 109 aa9.71□□□□□ -0.85
ACER3-201ENST00000278544 INSP01308 110 aa9.71□□□□□ -0.86
ACER3-201ENST00000278544 IGHV3-53P01767 116 aa9.71□□□□□ -0.86
ACER3-201ENST00000278544 COX8CQ7Z4L0 72 aa9.71□□□□□ -0.86
ACER3-201ENST00000278544 C1orf158Q8N1D5 194 aa9.71□□□□□ -0.86
ACER3-201ENST00000278544 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.86
ACER3-201ENST00000278544 F5H697 171 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 GIG44P09565 113 aaPredicted RBP9.7□□□□□ -0.86
ACER3-201ENST00000278544 A0A1B0GXF2 115 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 RPS20P60866 119 aaKnown RBP9.7□□□□□ -0.86
ACER3-201ENST00000278544 PMCHL1Q16048 86 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 GNB1LQ9BYB4 327 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 SAMD10Q9BYL1 202 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 GFRA4Q9GZZ7 299 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 IGHV3-16A0A0C4DH30 117 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 WFDC9Q8NEX5 89 aa9.7□□□□□ -0.86
ACER3-201ENST00000278544 TRAV2A0A0B4J234 112 aa9.69□□□□□ -0.86
ACER3-201ENST00000278544 D6R8Y8 96 aa9.69□□□□□ -0.86
ACER3-201ENST00000278544 RCHY1Q96PM5 261 aa9.69□□□□□ -0.86
ACER3-201ENST00000278544 HLA-DQA1P01909 254 aa9.69□□□□□ -0.86
ACER3-201ENST00000278544 MRAPQ8TCY5 172 aa9.69□□□□□ -0.86
ACER3-201ENST00000278544 PHOX2AO14813 284 aa9.69□□□□□ -0.86
ACER3-201ENST00000278544 INSL3P51460 131 aa9.69□□□□□ -0.86
ACER3-201ENST00000278544 WDR73Q6P4I2 378 aa9.69□□□□□ -0.86
ACER3-201ENST00000278544 FAM19A2Q8N3H0 131 aa9.68□□□□□ -0.86
ACER3-201ENST00000278544 IGHV4-30-4P0DP06 118 aa9.68□□□□□ -0.86
ACER3-201ENST00000278544 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
ACER3-201ENST00000278544 CKS2P33552 79 aa9.68□□□□□ -0.86
ACER3-201ENST00000278544 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
ACER3-201ENST00000278544 CTRLP40313 264 aa9.67□□□□□ -0.86
ACER3-201ENST00000278544 MRPL51Q4U2R6 128 aaKnown RBP9.67□□□□□ -0.86
ACER3-201ENST00000278544 CSTL1Q9H114 145 aa9.67□□□□□ -0.86
ACER3-201ENST00000278544 RETNQ9HD89 108 aa9.67□□□□□ -0.86
ACER3-201ENST00000278544 TRGV1A0A0A0MS02 117 aa9.67□□□□□ -0.86
ACER3-201ENST00000278544 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
ACER3-201ENST00000278544 RNASEKQ6P5S7 137 aaKnown RBP9.67□□□□□ -0.86
ACER3-201ENST00000278544 MCRIP2Q9BUT9 160 aaKnown RBP9.67□□□□□ -0.86
ACER3-201ENST00000278544 NOP10Q9NPE3 64 aaKnown RBP9.67□□□□□ -0.86
ACER3-201ENST00000278544 FABP4P15090 132 aa9.66□□□□□ -0.86
ACER3-201ENST00000278544 PMCHP20382 165 aa9.66□□□□□ -0.86
ACER3-201ENST00000278544 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
ACER3-201ENST00000278544 SERF1AO75920 110 aa9.66□□□□□ -0.86
ACER3-201ENST00000278544 NEGR1Q7Z3B1 354 aa9.66□□□□□ -0.86
ACER3-201ENST00000278544 LOC102724200A0A096LPH7 203 aaPredicted RBP9.66□□□□□ -0.86
ACER3-201ENST00000278544 CMYA5Q8N3K9 4069 aa9.66□□□□□ -0.86
ACER3-201ENST00000278544 TRAV9-1A0A075B6T8 112 aa9.65□□□□□ -0.86
ACER3-201ENST00000278544 ATP5L2Q7Z4Y8 100 aa9.65□□□□□ -0.86
ACER3-201ENST00000278544 DEFB130BP0DP73 79 aa9.65□□□□□ -0.86
ACER3-201ENST00000278544 DEFB130AP0DP74 79 aa9.65□□□□□ -0.86
ACER3-201ENST00000278544 SMIM15Q7Z3B0 74 aa9.65□□□□□ -0.86
ACER3-201ENST00000278544 P0DMU3 169 aa9.65□□□□□ -0.87
ACER3-201ENST00000278544 FAM231AP0DMU4 169 aa9.65□□□□□ -0.87
ACER3-201ENST00000278544 FAM231CP0DMU5 169 aa9.65□□□□□ -0.87
ACER3-201ENST00000278544 ZNF56Q15929 161 aa9.65□□□□□ -0.87
ACER3-201ENST00000278544 FAM104BQ5XKR9 115 aa9.65□□□□□ -0.87
ACER3-201ENST00000278544 RPL39LQ96EH5 51 aaKnown RBP9.65□□□□□ -0.87
ACER3-201ENST00000278544 ODF3Q96PU9 254 aa9.65□□□□□ -0.87
ACER3-201ENST00000278544 Q9UF83 564 aa9.65□□□□□ -0.87
ACER3-201ENST00000278544 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 S100A2P29034 98 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 OR2K2Q8NGT1 345 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 MT-ND6P03923 174 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 OR5AL1P0C617 328 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 Q6ZTI0 123 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 ALKBH7Q9BT30 221 aaPredicted RBP9.64□□□□□ -0.87
ACER3-201ENST00000278544 LOC105371267A0A1B0GV96 52 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 GAGE12BA1L429 117 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 GAGE7O76087 117 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 NPYP01303 97 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 GAGE12FP0CL80 117 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 GAGE12GP0CL81 117 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 GAGE12IP0CL82 117 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 RAB4AP20338 218 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 C18orf32Q8TCD1 76 aa9.64□□□□□ -0.87
ACER3-201ENST00000278544 DNHD1Q96M86 4753 aa9.63□□□□□ -0.87
ACER3-201ENST00000278544 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
ACER3-201ENST00000278544 PRELID3AQ96N28 172 aa9.63□□□□□ -0.87
ACER3-201ENST00000278544 H0Y8G0 127 aa9.63□□□□□ -0.87
ACER3-201ENST00000278544 RRN3P1Q2M238 152 aa9.63□□□□□ -0.87
ACER3-201ENST00000278544 RNF185Q96GF1 192 aa9.63□□□□□ -0.87
ACER3-201ENST00000278544 GOLT1BQ9Y3E0 138 aa9.63□□□□□ -0.87
ACER3-201ENST00000278544 TRGV11A0A075B6L2 103 aa9.62□□□□□ -0.87
ACER3-201ENST00000278544 C5orf52A6NGY3 159 aa9.62□□□□□ -0.87
ACER3-201ENST00000278544 SNAI2O43623 268 aa9.62□□□□□ -0.87
ACER3-201ENST00000278544 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
ACER3-201ENST00000278544 TDRG1Q3Y452 100 aa9.62□□□□□ -0.87
ACER3-201ENST00000278544 IFITM10A6NMD0 228 aa9.61□□□□□ -0.87
ACER3-201ENST00000278544 CMC4P56277 68 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms