RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 Q8NFD4 153 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 UBL5Q9BZL1 73 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 Q9H8V8 135 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 DEFB113Q30KQ7 82 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 BOD1L2Q8IYS8 172 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 PIFOQ8TCI5 191 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 SRCAPQ6ZRS2 3230 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 PLXNA2O75051 1894 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 IGKV1-17P01599 117 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 DEFB1P60022 68 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 CDPF1Q6NVV7 123 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 K7EP13 123 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 ZNF747Q9BV97 191 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 ZMAT4Q9H898 229 aa8.94□□□□□ -0.98
USP53-201ENST00000274030 HIVEP2P31629 2446 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 I3L2K1 104 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 UBE2BP63146 152 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 PPDPFLQ8WWR9 84 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 A0A1W2PPM0 123 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 H3BUA1 57 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 PATE2Q6UY27 113 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 CTSGP08311 255 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 DSCR8Q96T75 97 aa8.93□□□□□ -0.98
USP53-201ENST00000274030 CITED2Q99967 270 aaPredicted RBP8.92□□□□□ -0.98
USP53-201ENST00000274030 FREM1Q5H8C1 2179 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 hADV29S1A0JD25 119 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 K7EP34 96 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 ZNF493Q6ZR52 646 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 C8orf31Q8N9H6 132 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 ANKHD1Q8IWZ3 2542 aaKnown RBP8.92□□□□□ -0.98
USP53-201ENST00000274030 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 K7EMI3 77 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 LINC00173Q6ZV60 143 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 ADORA2A-AS1P86434 159 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 C12orf74Q32Q52 190 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 IGFL2Q6UWQ7 119 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 GP9P14770 177 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 GYPEP15421 78 aa8.92□□□□□ -0.98
USP53-201ENST00000274030 PRAC2D3DTV9 90 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 RMI2Q96E14 147 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 A0A1W2PNU3 283 aaPredicted RBP8.91□□□□□ -0.98
USP53-201ENST00000274030 CCL25O15444 150 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 IGHG4P01861 327 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 IGLV11-55A0A075B6I3 123 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 F8W1H4 67 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 DEFB4AO15263 64 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 IGHV3-30P01768 117 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 IGHV3-33P01772 117 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 IGHV3-30-3P0DP02 117 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 IGHV3-30-5P0DP03 117 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 Q8N9W7 124 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 NTN5Q8WTR8 489 aaPredicted RBP8.91□□□□□ -0.98
USP53-201ENST00000274030 DENND4CQ5VZ89 1909 aa8.91□□□□□ -0.98
USP53-201ENST00000274030 ARHGAP21Q5T5U3 1957 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 IGHV4OR15-8A0A075B7B6 117 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 A0A087WW49 117 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 ZFP36P26651 326 aaKnown RBP8.9□□□□□ -0.98
USP53-201ENST00000274030 NUPR1O60356 82 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 BUB3O43684 328 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 SEM1Q6ZVN7 128 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 PRR14LQ5THK1 2151 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 KMT2EQ8IZD2 1858 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 NPBQ8NG41 125 aa8.9□□□□□ -0.98
USP53-201ENST00000274030 A0A0J9YXV3 536 aa8.9□□□□□ -0.99
USP53-201ENST00000274030 E7EUB6 86 aa8.9□□□□□ -0.99
USP53-201ENST00000274030 RPL18AQ02543 176 aaKnown RBP8.89□□□□□ -0.99
USP53-201ENST00000274030 SRSF2Q01130 221 aaKnown RBP8.89□□□□□ -0.99
USP53-201ENST00000274030 PLA2G2EQ9NZK7 142 aa8.89□□□□□ -0.99
USP53-201ENST00000274030 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
USP53-201ENST00000274030 C1orf43Q9BWL3 253 aa8.89□□□□□ -0.99
USP53-201ENST00000274030 C10orf105Q8TEF2 133 aa8.89□□□□□ -0.99
USP53-201ENST00000274030 CRYBA4P53673 196 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 SLC25A29Q8N8R3 303 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 CFC1BP0CG36 223 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 CFC1P0CG37 223 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 C5orf56Q8N8D9 126 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 LYPD6BQ8NI32 183 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 RPL39P62891 51 aaKnown RBP8.88□□□□□ -0.99
USP53-201ENST00000274030 MRPL36Q9P0J6 103 aaKnown RBP8.88□□□□□ -0.99
USP53-201ENST00000274030 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 Q8N1Y9 231 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 DAND5Q8N907 189 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 TTTY13Q9BZ97 58 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 DOPEY1Q5JWR5 2465 aa8.88□□□□□ -0.99
USP53-201ENST00000274030 DSCAML1Q8TD84 2053 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 ATP6V0E2Q8NHE4 81 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 TDRG1Q3Y452 100 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 NDUFS5O43920 106 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 MSMPQ1L6U9 139 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 KRTAP27-1Q3LI81 207 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 UTF1Q5T230 341 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 C16orf54Q6UWD8 224 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 Q8N7P7 452 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 RNF138Q8WVD3 245 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 C9orf66Q5T8R8 295 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 C15orf53Q8NAA6 179 aa8.87□□□□□ -0.99
USP53-201ENST00000274030 IGHV4-28A0A0C4DH34 117 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 BAALC-AS2P0C853 105 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms